Transcript Information: R_Transcript_164942.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value4E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.54758882864156
Replicate 20.41992600832596
Replicate 30.68720212788457
Condition 2: 8 Hour
Replicate 10.4897172989449
Replicate 20.22360881841186
Replicate 30.18151610620387
Condition 3: 24 Hour
Replicate 10.22957807227704
Replicate 20.44110517781155
Replicate 30.21887704686897


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_164942.p1 GENE.R_Transcript_164942~~R_Transcript_164942.p1 ORF type:complete len:100 (+),score=23.36,PPR_2|PF13041.2|4.1e-16,PPR_2|PF13041.2|5.1e-12,PPR_1|PF12854.3|8.1e-11,PPR_1|PF12854.3|3.5e-06,PPR_1|PF12854.3|5.6,PPR|PF01535.16|5.5e-09,PPR|PF01535.16|3.7e-05,PPR|PF01535.16|2.1e+02,PPR_3|PF13812.2|0.00017,PPR_3|PF13812.2|0.00019,PPR_3|PF13812.2|1.8e+03 R_Transcript_164942:318-617(+)
ATGTGGGCTTCAACTCTTCAAAGAGATCAAGCTGAGGGGATAACTTCTGATGTCGTCACCTATAGTTCACTGCTGGATGGTCTATGTGAAAATGGACAACTTGATGAGGGTGTAGCAATGTTCAGGTTGATGGAGAGTAATGGAGTGAGGCCTAATCTTGTGAGTTATAATGTGTTAATTGATGCTATGTCTGAAAAAGGGAATTGGAAAGATGCAGCTCATATCTTTTCCAAGCTCATGACCAAGGGACTCCGACAAGATCCTATCACCTATACTGTAATGATAAAAAGGACTGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_164942.p1 GENE.R_Transcript_164942~~R_Transcript_164942.p1 ORF type:complete len:100 (+),score=23.36,PPR_2|PF13041.2|4.1e-16,PPR_2|PF13041.2|5.1e-12,PPR_1|PF12854.3|8.1e-11,PPR_1|PF12854.3|3.5e-06,PPR_1|PF12854.3|5.6,PPR|PF01535.16|5.5e-09,PPR|PF01535.16|3.7e-05,PPR|PF01535.16|2.1e+02,PPR_3|PF13812.2|0.00017,PPR_3|PF13812.2|0.00019,PPR_3|PF13812.2|1.8e+03 R_Transcript_164942:318-617(+)
MWASTLQRDQAEGITSDVVTYSSLLDGLCENGQLDEGVAMFRLMESNGVRPNLVSYNVLIDAMSEKGNWKDAAHIFSKLMTKGLRQDPITYTVMIKRTV*

Click here to download the sequence:
Link to NCBI Protein BLAST