Transcript Information: R_Transcript_164944.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value2E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.30677245302048
Replicate 20.17643949929662
Replicate 30
Condition 2: 8 Hour
Replicate 10.20576357098525
Replicate 20
Replicate 30.45760362908539
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.5517908744596


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_164944.p1 GENE.R_Transcript_164944~~R_Transcript_164944.p1 ORF type:internal len:119 (+),score=23.96,PPR_2|PF13041.2|4.4e-06,PPR_2|PF13041.2|2e-11,PPR_2|PF13041.2|2.3e-15,PPR_1|PF12854.3|1.3e-05,PPR_1|PF12854.3|5.1e-05,PPR_1|PF12854.3|6.1e-10,PPR_1|PF12854.3|0.0007,PPR|PF01535.16|1.4e-06,PPR|PF01535.16|0.0029,PPR|PF01535.16|6.7e-09,PPR|PF01535.16|16,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|0.00035,PPR_3|PF13812.2|2.6e+02 R_Transcript_164944:3-356(+)
GATATTGTCACCTATAATTCATTGGTAGATGGCCTTTCTAAAGGTGGCCAACTTGAAGAGGCTCTAGCAATGTCTAAAGAGATAGAGAGGAATGGAGTGGTTAAGGGTCTTGTGAGCTGTAATGTGTTAATTGATGGTATGTGTAAAAACGGGAATCGGGAAGAGGCAACACCTTTTTCCAAGCTCATGAGCAAGGGACCGCAACCAGATCCTATTACCTATAATGTAATGATGGAAGGACTTTGTAGGAAGGGCTTGTTATATCAGGCAGATGAATTATTGAAGAAGATGGAGGAGCATGGTTGTTTTCCAGATGATGTTACCTACAATAACATTATTAGGGGGTTCCTTTGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_164944.p1 GENE.R_Transcript_164944~~R_Transcript_164944.p1 ORF type:internal len:119 (+),score=23.96,PPR_2|PF13041.2|4.4e-06,PPR_2|PF13041.2|2e-11,PPR_2|PF13041.2|2.3e-15,PPR_1|PF12854.3|1.3e-05,PPR_1|PF12854.3|5.1e-05,PPR_1|PF12854.3|6.1e-10,PPR_1|PF12854.3|0.0007,PPR|PF01535.16|1.4e-06,PPR|PF01535.16|0.0029,PPR|PF01535.16|6.7e-09,PPR|PF01535.16|16,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|0.00035,PPR_3|PF13812.2|2.6e+02 R_Transcript_164944:3-356(+)
DIVTYNSLVDGLSKGGQLEEALAMSKEIERNGVVKGLVSCNVLIDGMCKNGNREEATPFSKLMSKGPQPDPITYNVMMEGLCRKGLLYQADELLKKMEEHGCFPDDVTYNNIIRGFLC

Click here to download the sequence:
Link to NCBI Protein BLAST