Transcript Information: R_Transcript_16510.p1


Annotated TAIR IDAT3G56370.1
Annotated Gene NameLeucine-rich repeat protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20899403-20902390 | Reverse length=964
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.813600155331
Replicate 212.481373656095
Replicate 318.367722856874
Condition 2: 8 Hour
Replicate 113.550186043701
Replicate 213.085937011782
Replicate 314.33119976086
Condition 3: 24 Hour
Replicate 123.193513667414
Replicate 217.866118341546
Replicate 322.449504088512


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_16510.p1 GENE.R_Transcript_16510~~R_Transcript_16510.p1 ORF type:complete len:974 (+),score=216.44,LRR_8|PF13855.2|0.0021,LRR_8|PF13855.2|7.7e-06,LRR_8|PF13855.2|4e-08,LRR_8|PF13855.2|0.00026,LRR_8|PF13855.2|3.3e-08,LRR_8|PF13855.2|1,LRR_8|PF13855.2|2.4e-09,LRR_8|PF13855.2|7.2e-09,LRR_8|PF13855.2|9.9,LRR_8|PF13855.2|1.5e+03,Pkinase_Tyr|PF07714.13|1.3e-43,Pkinase|PF00069.21|1.5e-41,LRR_4|PF12799.3|5.1,LRR_4|PF12799.3|0.022,LRR_4|PF12799.3|0.074,LRR_4|PF12799.3|0.00089,LRR_4|PF12799.3|0.005,LRR_4|PF12799.3|0.21,LRR_4|PF12799.3|0.018,LRR_4|PF12799.3|1.7,LRR_4|PF12799.3|0.96,LRR_4|PF12799.3|0.00038,LRR_4|PF12799.3|0.0049,LRR_4|PF12799.3|2.5,LRR_4|PF12799.3|0.099,LRR_4|PF12799.3|5.7e+02,LRR_1|PF00560.29|53,LRR_1|PF00560.29|0.31,LRR_1|PF00560.29|1.1e+02,LRR_1|PF00560.29|32,LRR_1|PF00560.29|3.3,LRR_1|PF00560.29|1.2,LRR_1|PF00560.29|1.6e+02,LRR_1|PF00560.29|3.1e+02,LRR_1|PF00560.29|11,LRR_1|PF00560.29|53,LRR_1|PF00560.29|0.94,LRR_1|PF00560.29|6.2,LRR_1|PF00560.29|1.2e+02,LRR_1|PF00560.29|2.3e+02,LRR_1|PF00560.29|4e+02,LRR_1|PF00560.29|3.6,LRR_1|PF00560.29|20,LRRNT_2|PF08263.8|2.4e-11 R_Transcript_16510:624-3545(+)
ATGAAGAAGCTGGTTATAATTGTTTTCACTTTTCTTGTTATTCTGGGTCTGGGATTACCTTGTACAAGAAGCTCAATAAGCCCATCTTTGAATGATGATGTATTGGGGCTAATTGTATTCAAAGCAGACATTCAAGACCCAAATGGGAAACTAACAACATGGAATGAAGATGATGATAGCCCTTGTAATTGGGTTGGGATCCAATGTAACCCTAGAAACAAGAGGGTTTCTGAGCTCAATCTTGATGGGTTTTCATTATCAGGCAAGCTTGGACGTGGCCTTTTACAGCTTCAATCACTTAGGAAGCTCTCACTTTCCAAAAACAACCTCACTGGTACTCTTACTTCATCTCTTCTTAGGCTCTCAAACCTTAGAATCCTTGATTTGAGCGACAATAACTTATCTGGGGAGTTGGGTTCTGATTTTTTCGAACAATGTGGGCCCTTGAGAACTGTTTCTTTGGCTGGTAACAAGTTCTCAGGACAGATCCCTGATAGTTTGAGCTCTTGTGTTGGTTTATCTGTGCTTAACTTGTCAAACAACCAGTTTTCTGGGGATCTTCCTTCTGGGATTTGGGATTTACATGGGCTAAGGTCACTTGATCTGTCTTCTAACATGTTGAGTGATGAAATCCCAAAAGGGATTGATGGTTTGTATAATTTGAGAAGTATTAATTTGAGTGGTAACAAGCTTACTGGGTCTGTTCCTGCTGATGTTGGTGGGTGTTCTTTGTTGAGATCACTTGATTTTAGTGAGAATTTGCTATCTGGGAATTTGCCATCTTCATTATTGAACTTGAGTTTTTGTGGGGTTGTTGATTTGAGAGGGAATTCACTTGAGGGTCAAGTTCCTGCTTGGATTGGAGGGTTGAGAGCCCTTGAGAGTCTTGATCTTTCAGCTAATAATTTGACTGGGGAATTGCCCACTTCTATGGGGAACCTTAGGTCATTAAAGATGTTGAATATGTCAATCAATGGTTTGAGTGGAAACTTGCCTGAATCTATGGTTGGTTGTGCTAGTCTTGAGGTGTTAGATTTCAGGCAGAACTTGTTGACTGGTGATTTGCCTAAGTGGGTTTTCAAGGTTGGTTTGCAAGAAGTTCTTCTCTCAGAGAATAAGTTTGGTGGAATCATGAATGATTCTATCAATTCAGCTGAACCCATCTCATATAAGAGCCTACAAGTGTTGGATTTGTCTCAAAATGAGTTTACTGGGGCTATTCCTTCCTCTATTGGGGGTTTCACCAGCTTAGAGTTGTTGAATTTGTCTAAGAACTCTCTGACTGGCTCTATTCCTGGAAATGTTGGAGAATTGAAAGCATTGCATGTTCTTGATTTGAGTGAGAATCAGTTGAATGGGAGCATCCCTTCTGAAATTGGAGGAGCTACTTCTCTAAGAGATTTGATACTCCAGAAGAACTTCATTCAGGGGAATATACCAACCTCACTTGAGCATTGCTCTTCATTGTCAGACTTGATCCTATCACATAATAGCCTTGAGGGACCAGTACCTGTAGCTCTATCAAAACTTGATAGTCTACAAGTTTTGGACCTTTCGTTCAATGACCTAAGTGGGACTCTACCAAAACAACTAGCAAATCTCCAACATCTTCTTTCTTTCAATGTTTCGAATAACAATCTCGAAGGTGAACTTCCTAGCGGTTTCTTTAACACCATATCTCCCGCCTCTGTCTCGGGAAATCCTGCTCTTTGTGGCTCGGCTACAAAGAGATCTTGTGCAGCTGTCCTTCCTAAACCCATTGTCTTAAATCCAAACTCCACTTCTGACTCCTCCTCGGGTACTTCTGTGGCTCCTACACTTGCTCGCAAACGAAAAATCCTCAGCATATCTGCGCTCATTGCAATTGGTGCGGCTGCTGCTATTGTAATTGGTGTGATTGCCATCACAGTTCTCAATCTTCGTGTCAGGGCCTCTGCATCTCGTTCTGCAGCTGCTCTTGCACTGTCTAATGGCGATGATTTCAGTCGTTCTGCGTCAACAGATGCCAATTCTGGAAAGCTAGTCATGTTCTCAGGCGAGCCTGATTTTAGTATGGGGACCCATGCTCTACTAAACAAGGATTGTGAGCTTGGTCGTGGAGGATTTGGGGCTGTCTACCGAACTATTCTTCAAAACGGTCGCCCTGTTGCCATAAAAAAGCTCACTGTTTCGAGTCTGGTCAAGTCTCAGGATGATTTTGAGCGAGAGGTTAAGAAACTGGGAAAAATCCGGCACCATAATCTTGTTACCCTCGAAGGGTATTATTGGACTCCATCACTGCAACTCCTAATTTACGAATTTGTTTCTGGTGGAAGTTTGCATAAGCGTCTTCATGAAGGAAAAAGCGGGAACTTTCTTTCATGGAACGAGAGATTCAATATAATTCTTGGAATGGCCAAAGGGTTATCTCACTTGCATCAATTGAATGTCATCCACTACAATCTCAAATCGAGCAACATTCTCATAGATAGCAACAGTGAACCTAAAGTGGGAGATTTTGGCTTAGCAAGGCTGTTGCCAATGCTGGACCGATACATATTAAGCAGCAAAATTCAGAGCGCACTTGGTTACATGGCACCTGAATTTGCCTGCATGACAGTGAAAATTACAGAAAAATGCGATGTCTATGGTTTCGGAATCCTGGCATTGGAGGTGGTGACGGGGAAGAGACCTGTCGAGTACATGGAGGATGACGTGGTTGTTCTGTGCGAGATGGTCAGGGGAGCACTGGAAGAAGGGCGAGTGGAAGAATGTGTTGATGAGAGACTCCAAGGTAATTTCCCAGCTGAAGAAGCCATTCCAGTGATGAAATTAGGGCTTATTTGCACATCACAGGTGCCATCAAACAGGCCTGATATGAGAGAAGTGGTTAGCATATTGGAGTTGATCAGATGTCCCTCGGAAGGCCTAGAATCAGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_16510.p1 GENE.R_Transcript_16510~~R_Transcript_16510.p1 ORF type:complete len:974 (+),score=216.44,LRR_8|PF13855.2|0.0021,LRR_8|PF13855.2|7.7e-06,LRR_8|PF13855.2|4e-08,LRR_8|PF13855.2|0.00026,LRR_8|PF13855.2|3.3e-08,LRR_8|PF13855.2|1,LRR_8|PF13855.2|2.4e-09,LRR_8|PF13855.2|7.2e-09,LRR_8|PF13855.2|9.9,LRR_8|PF13855.2|1.5e+03,Pkinase_Tyr|PF07714.13|1.3e-43,Pkinase|PF00069.21|1.5e-41,LRR_4|PF12799.3|5.1,LRR_4|PF12799.3|0.022,LRR_4|PF12799.3|0.074,LRR_4|PF12799.3|0.00089,LRR_4|PF12799.3|0.005,LRR_4|PF12799.3|0.21,LRR_4|PF12799.3|0.018,LRR_4|PF12799.3|1.7,LRR_4|PF12799.3|0.96,LRR_4|PF12799.3|0.00038,LRR_4|PF12799.3|0.0049,LRR_4|PF12799.3|2.5,LRR_4|PF12799.3|0.099,LRR_4|PF12799.3|5.7e+02,LRR_1|PF00560.29|53,LRR_1|PF00560.29|0.31,LRR_1|PF00560.29|1.1e+02,LRR_1|PF00560.29|32,LRR_1|PF00560.29|3.3,LRR_1|PF00560.29|1.2,LRR_1|PF00560.29|1.6e+02,LRR_1|PF00560.29|3.1e+02,LRR_1|PF00560.29|11,LRR_1|PF00560.29|53,LRR_1|PF00560.29|0.94,LRR_1|PF00560.29|6.2,LRR_1|PF00560.29|1.2e+02,LRR_1|PF00560.29|2.3e+02,LRR_1|PF00560.29|4e+02,LRR_1|PF00560.29|3.6,LRR_1|PF00560.29|20,LRRNT_2|PF08263.8|2.4e-11 R_Transcript_16510:624-3545(+)
MKKLVIIVFTFLVILGLGLPCTRSSISPSLNDDVLGLIVFKADIQDPNGKLTTWNEDDDSPCNWVGIQCNPRNKRVSELNLDGFSLSGKLGRGLLQLQSLRKLSLSKNNLTGTLTSSLLRLSNLRILDLSDNNLSGELGSDFFEQCGPLRTVSLAGNKFSGQIPDSLSSCVGLSVLNLSNNQFSGDLPSGIWDLHGLRSLDLSSNMLSDEIPKGIDGLYNLRSINLSGNKLTGSVPADVGGCSLLRSLDFSENLLSGNLPSSLLNLSFCGVVDLRGNSLEGQVPAWIGGLRALESLDLSANNLTGELPTSMGNLRSLKMLNMSINGLSGNLPESMVGCASLEVLDFRQNLLTGDLPKWVFKVGLQEVLLSENKFGGIMNDSINSAEPISYKSLQVLDLSQNEFTGAIPSSIGGFTSLELLNLSKNSLTGSIPGNVGELKALHVLDLSENQLNGSIPSEIGGATSLRDLILQKNFIQGNIPTSLEHCSSLSDLILSHNSLEGPVPVALSKLDSLQVLDLSFNDLSGTLPKQLANLQHLLSFNVSNNNLEGELPSGFFNTISPASVSGNPALCGSATKRSCAAVLPKPIVLNPNSTSDSSSGTSVAPTLARKRKILSISALIAIGAAAAIVIGVIAITVLNLRVRASASRSAAALALSNGDDFSRSASTDANSGKLVMFSGEPDFSMGTHALLNKDCELGRGGFGAVYRTILQNGRPVAIKKLTVSSLVKSQDDFEREVKKLGKIRHHNLVTLEGYYWTPSLQLLIYEFVSGGSLHKRLHEGKSGNFLSWNERFNIILGMAKGLSHLHQLNVIHYNLKSSNILIDSNSEPKVGDFGLARLLPMLDRYILSSKIQSALGYMAPEFACMTVKITEKCDVYGFGILALEVVTGKRPVEYMEDDVVVLCEMVRGALEEGRVEECVDERLQGNFPAEEAIPVMKLGLICTSQVPSNRPDMREVVSILELIRCPSEGLESG*

Click here to download the sequence:
Link to NCBI Protein BLAST