Transcript Information: R_Transcript_16512.p1


Annotated TAIR IDAT3G56370.1
Annotated Gene NameLeucine-rich repeat protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20899403-20902390 | Reverse length=964
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.868486828482
Replicate 28.8963705887613
Replicate 39.8947660338019
Condition 2: 8 Hour
Replicate 17.5729479218284
Replicate 26.1550056202026
Replicate 37.8781732692607
Condition 3: 24 Hour
Replicate 110.721532653763
Replicate 28.7993661759314
Replicate 312.094649187811


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_16512.p1 GENE.R_Transcript_16512~~R_Transcript_16512.p1 ORF type:complete len:970 (+),score=188.78,LRR_8|PF13855.2|2.6e-06,LRR_8|PF13855.2|0.66,LRR_8|PF13855.2|3.5e-05,LRR_8|PF13855.2|2.9e-06,LRR_8|PF13855.2|0.00069,LRR_8|PF13855.2|1.1e-05,LRR_8|PF13855.2|0.0013,LRR_8|PF13855.2|8.3e-06,LRR_8|PF13855.2|0.0064,LRR_8|PF13855.2|3.5e-10,LRR_8|PF13855.2|1.2e-09,LRR_8|PF13855.2|1.2e+04,LRR_8|PF13855.2|1.2e+03,Pkinase|PF00069.21|1.4e-43,Pkinase_Tyr|PF07714.13|1.3e-42,LRR_4|PF12799.3|0.56,LRR_4|PF12799.3|0.2,LRR_4|PF12799.3|0.037,LRR_4|PF12799.3|14,LRR_4|PF12799.3|0.057,LRR_4|PF12799.3|0.46,LRR_4|PF12799.3|0.77,LRR_4|PF12799.3|0.001,LRR_4|PF12799.3|1.3,LRR_4|PF12799.3|0.0028,LRR_4|PF12799.3|0.01,LRR_1|PF00560.29|3,LRR_1|PF00560.29|0.081,LRR_1|PF00560.29|3.4e+02,LRR_1|PF00560.29|2.3e+03,LRR_1|PF00560.29|2.6,LRR_1|PF00560.29|5e+02,LRR_1|PF00560.29|28,LRR_1|PF00560.29|2.6,LRR_1|PF00560.29|0.45,LRR_1|PF00560.29|1.6e+03,LRR_1|PF00560.29|1e+04,LRR_1|PF00560.29|4.7,LRR_1|PF00560.29|4.9,LRR_1|PF00560.29|1.9e+02,LRR_1|PF00560.29|3.1,LRR_1|PF00560.29|2e+02,LRR_1|PF00560.29|6,LRR_1|PF00560.29|1.8e+02,LRRNT_2|PF08263.8|2.8e-12,LRRNT_2|PF08263.8|2.5e+03 R_Transcript_16512:229-3138(+)
ATGCTACTAAAATCTCTGTTTTTTTGGGTGTGTTTTGTATTGTTACCTTGCATTGTTGTGAGTTCAGACTCATTGAATGATGATGTTCTTGGGTTAATAGTGTTTAAGGCAGGTCTTGATGACCCTGAATCCAAGTTAGTATCTTGGAATGATAGTGATGATAGTCCTTGCAAATGGAAAGGTATAAGATGTGATGAAAACTCAAACAGAGTAACTGAAATTACTCTTGATGGTTTCTCACTTTCTGGCCAGATTAGTAGAAGTCTTTTGAGGTTACAATCACTCCAAAAACTGAGTCTTTCAAACAACAATCTTTCTGGGTCTGTAAACCCTGAATTTGCCCACCTTTGGAGCTTGCAATCCCTTGATTTGAGTGGCAACAATCTCTCAGGTTCAATCCCTTCTGAGCTTTTTCAACACTGTGGGTCTTTAAAGTTTGTTTCTTTTGCCAACAATAGGTTGCTTGGTGTGATACCTGAGTCTTTAGGCTCTTGTATGACCTTACAAGCTGTCAACTTTTCATCCAATCATATCTCAGGGAAGTTGCCTTCCAAAATCTGGTCTTTGAATGGGTTACAATCACTTGATTTGTCTAATAATCTATTAGAAGGTCAACTTCCTGGTGGATTTGGGAGTATGTATAGTTTGAAGGTTTTGAGTTTAGGTAAAAATGCATTTACTGGGCAGTTACCTGATGATATTGGAAGTTGTGGGCAGTTACAAAAGATTGATTTTAGTGAGAATTCATTCTCTGGGGTTGTTCCTGAATCACTACAAAAGCTTAATATGTGTACTTCTGTGAGTTTGAATGGTAATTTACTCACTGGGGAAGTTCCTAATTGGATTGGTCATATGCAAAGCCTTGAAACTTTGGATCTTTCTTCAAACAGATTCTTTGGAAGGATTCCATTTGAGATAGGAAATGTCAAGTCATTGAAAGTATTGAATTTATCCTCCAATGGGTTGATAGGCAATCTGCCTGAATCTCTGATGAACTGTGTGAATCTTCTGACAGTTGATTTTAGTCACAATATGTTTAAAGGGAAATTACCCAATTGGATTTTTGAGTTAGGTTTACAAGTAGTTTCACTTTCTGGGAATAAGTTTAAGGGAAATGTTGAGTACCCTTCTGTTAGATCAACTTCACCTTCTTATAATAGCCTCCAGGTTCTTGATTTGTCCTGTAATGAATTGTCTGGTGTTATTCCTTCAGAAATTGGTGCTTTTAGAAGTTTACAATACTTGAATATGTCACAGAACTCATTAATGGGTGATATTGCAAGAAGTTTGGGTGATTTGAATATGATTCAAGTCATTGATTTGAGTCATAATATGCTGAATGGGAGTATACCTCCTGAAATAGGAGGTGATGTTGCACTTAGAGAGCTAAGGCTTGAAGGGAACAGATTAACTGGGAGTATTCCTTCTCAGATTGAGAAATGCTCATCTTTGACTACACTAATGTTGTCAGAGAACAATCTCACAGGTTCAATACCTCATGCAGTTGCAAACCTAACCAACCTTGAAGTTGTTGATTTGTCTCATAATAATCTCTCTGGCAACCTTCCGAAAGAGCTAACGGATCTCCCACACCTAACCGCCTTTAACATCTCAAGCAACAACCTAGAAGGAGAACTTCCTGCTGGTGGCTTCTTCGACAATATCCCTCTCTCGTCTGTCAATGGAAACCCGTCATTATGTGGATCGGTGGTTAACCAATCTTGTCCTTCTAACCACCCTAAGCCTATTGTTCTCAACCCTAATTCTTCCTCGGATAATGGGGATGGCTCTTTCCCAAGTACCCGTCACAAGAAGCTTGTGCTCAGCATCTCTGCCCTTATTGCCATCAGTGCTGCTGCATTCATCTTCCTTGGTGTCGTGATAATCACTATACTCAACTTCCGTGTCCGTAATTCTGCTGCTCGCTCGGCTGCACCCTTAGCATTCTCGGCCAGGGATGAGTTCAGCCACTCTCCGATGAGTGATTCACAGTATGGAAAGCTTGTCATGTTCTCTGGTGAAGCTGATTTCGGAGCTGGGGCCCATGCTCTACTCAATAAAGACTCTGAGCTTGGTCGTGGGGGTTTTGGAGTCGTTTATCATACAGTTCTTGCAGATGGTCGCTCTGTTGCAATTAAGAAGCTCAGCATCTCGAGTTTGATAAAGTCTCAAGAGGAGTTCGAGAGGGAGGTTAGGAAGCTCGGAAAAGTGAGGCACCATAATCTCGTGGCATTAGAAGGATACTATTGGACCCCGTCTTTGCAGCTCCTAATCAACGAATATGTTCCTGGTGGGAGTTTGTTCAAGCATCTTCATGACGATCCTAACAGAACTTCTCTTTCATGGCACCAACGGTTCAACATCGTTGTTGGCATGGCAAAGGGTTTGGCTCATTTGCATCAGATGAACATAACTCACTACAACCTCAAATCGTCAAACATTCTGCTTGACAGCAATGGTGAGCCCAAGGTTGGAGACTTTGGCCTGGCCAGGTTGTTGCCTATGCTAGACCGATACATTTTGAGCAGCAAGATTCAGAGTGCACTCGGGTACATGGCACCTGAATTTGCATGTCGAACTGTCAAGATAACCGAGAAATGTGATGTCTATGGTTTTGGAATCTTGGTACTTGAAGTTGTAACCGGGAAGAAGCCAGTAGAATACATGGAGGATGATGTTGTCGTGCTTTGTGATATGATTAGAGGCGCTTTGGAGGAAGGCAAGGCAGAGGATTGTATCGATCAGAGACTTCTTGGGAACTTTGTGGCCGAGGAGGTTATTCCAGTGATAAAACTCGGTTTGATTTGTGCATCTCAGGTTCCATCGAATCGACCAGATATGGCAGAGGTGGTTAACATATTGGAGCTCATCCAATGCCCTTCTGAAGGACGAGAAGAGGAGATCGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_16512.p1 GENE.R_Transcript_16512~~R_Transcript_16512.p1 ORF type:complete len:970 (+),score=188.78,LRR_8|PF13855.2|2.6e-06,LRR_8|PF13855.2|0.66,LRR_8|PF13855.2|3.5e-05,LRR_8|PF13855.2|2.9e-06,LRR_8|PF13855.2|0.00069,LRR_8|PF13855.2|1.1e-05,LRR_8|PF13855.2|0.0013,LRR_8|PF13855.2|8.3e-06,LRR_8|PF13855.2|0.0064,LRR_8|PF13855.2|3.5e-10,LRR_8|PF13855.2|1.2e-09,LRR_8|PF13855.2|1.2e+04,LRR_8|PF13855.2|1.2e+03,Pkinase|PF00069.21|1.4e-43,Pkinase_Tyr|PF07714.13|1.3e-42,LRR_4|PF12799.3|0.56,LRR_4|PF12799.3|0.2,LRR_4|PF12799.3|0.037,LRR_4|PF12799.3|14,LRR_4|PF12799.3|0.057,LRR_4|PF12799.3|0.46,LRR_4|PF12799.3|0.77,LRR_4|PF12799.3|0.001,LRR_4|PF12799.3|1.3,LRR_4|PF12799.3|0.0028,LRR_4|PF12799.3|0.01,LRR_1|PF00560.29|3,LRR_1|PF00560.29|0.081,LRR_1|PF00560.29|3.4e+02,LRR_1|PF00560.29|2.3e+03,LRR_1|PF00560.29|2.6,LRR_1|PF00560.29|5e+02,LRR_1|PF00560.29|28,LRR_1|PF00560.29|2.6,LRR_1|PF00560.29|0.45,LRR_1|PF00560.29|1.6e+03,LRR_1|PF00560.29|1e+04,LRR_1|PF00560.29|4.7,LRR_1|PF00560.29|4.9,LRR_1|PF00560.29|1.9e+02,LRR_1|PF00560.29|3.1,LRR_1|PF00560.29|2e+02,LRR_1|PF00560.29|6,LRR_1|PF00560.29|1.8e+02,LRRNT_2|PF08263.8|2.8e-12,LRRNT_2|PF08263.8|2.5e+03 R_Transcript_16512:229-3138(+)
MLLKSLFFWVCFVLLPCIVVSSDSLNDDVLGLIVFKAGLDDPESKLVSWNDSDDSPCKWKGIRCDENSNRVTEITLDGFSLSGQISRSLLRLQSLQKLSLSNNNLSGSVNPEFAHLWSLQSLDLSGNNLSGSIPSELFQHCGSLKFVSFANNRLLGVIPESLGSCMTLQAVNFSSNHISGKLPSKIWSLNGLQSLDLSNNLLEGQLPGGFGSMYSLKVLSLGKNAFTGQLPDDIGSCGQLQKIDFSENSFSGVVPESLQKLNMCTSVSLNGNLLTGEVPNWIGHMQSLETLDLSSNRFFGRIPFEIGNVKSLKVLNLSSNGLIGNLPESLMNCVNLLTVDFSHNMFKGKLPNWIFELGLQVVSLSGNKFKGNVEYPSVRSTSPSYNSLQVLDLSCNELSGVIPSEIGAFRSLQYLNMSQNSLMGDIARSLGDLNMIQVIDLSHNMLNGSIPPEIGGDVALRELRLEGNRLTGSIPSQIEKCSSLTTLMLSENNLTGSIPHAVANLTNLEVVDLSHNNLSGNLPKELTDLPHLTAFNISSNNLEGELPAGGFFDNIPLSSVNGNPSLCGSVVNQSCPSNHPKPIVLNPNSSSDNGDGSFPSTRHKKLVLSISALIAISAAAFIFLGVVIITILNFRVRNSAARSAAPLAFSARDEFSHSPMSDSQYGKLVMFSGEADFGAGAHALLNKDSELGRGGFGVVYHTVLADGRSVAIKKLSISSLIKSQEEFEREVRKLGKVRHHNLVALEGYYWTPSLQLLINEYVPGGSLFKHLHDDPNRTSLSWHQRFNIVVGMAKGLAHLHQMNITHYNLKSSNILLDSNGEPKVGDFGLARLLPMLDRYILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGILVLEVVTGKKPVEYMEDDVVVLCDMIRGALEEGKAEDCIDQRLLGNFVAEEVIPVIKLGLICASQVPSNRPDMAEVVNILELIQCPSEGREEEIE*

Click here to download the sequence:
Link to NCBI Protein BLAST