Transcript Information: R_Transcript_165557.p1


Annotated TAIR IDAT1G64100.1
Annotated Gene Namepentatricopeptide (PPR) repeat-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23791585-23793641 | Forward length=666
E-Value2E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.13323329164028
Replicate 20.15325766727225
Replicate 30.16720246420549
Condition 2: 8 Hour
Replicate 10.35745788244154
Replicate 20.48965434688727
Replicate 30.13249350817801
Condition 3: 24 Hour
Replicate 10.16757523523872
Replicate 20.1609872911721
Replicate 30.47929280336272


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_165557.p1 GENE.R_Transcript_165557~~R_Transcript_165557.p1 ORF type:internal len:137 (+),score=28.06,PPR_2|PF13041.2|4.4e-12,PPR_2|PF13041.2|1.6e-21,PPR_2|PF13041.2|1.3e-17,PPR_2|PF13041.2|1.6e-09,PPR_1|PF12854.3|0.001,PPR_1|PF12854.3|3.1e-13,PPR_1|PF12854.3|5.1e-11,PPR_1|PF12854.3|3.4e-12,PPR|PF01535.16|0.028,PPR|PF01535.16|4.3e-09,PPR|PF01535.16|2.4e-07,PPR|PF01535.16|4.7e-08,PPR_3|PF13812.2|0.067,PPR_3|PF13812.2|5.5e-06,PPR_3|PF13812.2|3.8e-07,PPR_3|PF13812.2|5.3e-06 R_Transcript_165557:3-410(+)
GTTACCTTTGGCACTATGGTCAGAGGCATTTGCAGAATTGGCGACAATGCTGGTGCTCTCCACTTGCTTAGGAATATGCAGCGTGTTCACTGCCACCCTGATGTTGTTACTTACAACACTATAATTGATAGCCTCTGTAAAGACAGGTTCTTGCCTCAAGCCCTCAAGCTTTTCTCCGAGATGAAAAGCCTGGGCATTTCACCTAATGTCGTCACTTACAATACATTAGTTCGAGGCTTGTGCACTTTGGGGCGTTGGCAAGATGTTGAGGCATTGTTCACTGAAATGTTGGACAATAACATAGCTCCAGATGTTGAGACTTTCAACACCGTGATTGACATGCTTTGTAAAGAAGGAAGGGTGGATGAAGCACATGCCATCCTAGAATACATGCTTGAGAGAGGTGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_165557.p1 GENE.R_Transcript_165557~~R_Transcript_165557.p1 ORF type:internal len:137 (+),score=28.06,PPR_2|PF13041.2|4.4e-12,PPR_2|PF13041.2|1.6e-21,PPR_2|PF13041.2|1.3e-17,PPR_2|PF13041.2|1.6e-09,PPR_1|PF12854.3|0.001,PPR_1|PF12854.3|3.1e-13,PPR_1|PF12854.3|5.1e-11,PPR_1|PF12854.3|3.4e-12,PPR|PF01535.16|0.028,PPR|PF01535.16|4.3e-09,PPR|PF01535.16|2.4e-07,PPR|PF01535.16|4.7e-08,PPR_3|PF13812.2|0.067,PPR_3|PF13812.2|5.5e-06,PPR_3|PF13812.2|3.8e-07,PPR_3|PF13812.2|5.3e-06 R_Transcript_165557:3-410(+)
VTFGTMVRGICRIGDNAGALHLLRNMQRVHCHPDVVTYNTIIDSLCKDRFLPQALKLFSEMKSLGISPNVVTYNTLVRGLCTLGRWQDVEALFTEMLDNNIAPDVETFNTVIDMLCKEGRVDEAHAILEYMLERGE

Click here to download the sequence:
Link to NCBI Protein BLAST