Transcript Information: R_Transcript_165562.p1


Annotated TAIR IDAT1G63080.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23388884-23390728 | Reverse length=614
E-Value3E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.35319703427237
Replicate 20.16965583761983
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_165562.p1 GENE.R_Transcript_165562~~R_Transcript_165562.p1 ORF type:3prime_partial len:130 (-),score=20.47,PPR_1|PF12854.3|2.7e-10,PPR_1|PF12854.3|3.4e-11,PPR_1|PF12854.3|2.6e-10,PPR_2|PF13041.2|7.9e-19,PPR_2|PF13041.2|1.6e-07,PPR_2|PF13041.2|3.5e-08,PPR|PF01535.16|5.1e-08,PPR|PF01535.16|2.6e-07,PPR|PF01535.16|2.7e-07,PPR_3|PF13812.2|3.6e-05,PPR_3|PF13812.2|2e-06,PPR_3|PF13812.2|9.8e-07 R_Transcript_165562:3-389(-)
ATGCTCAAGATTAAACCTTCCCCACCTTTCTCCACAGTCATCTCTCTCTCCAGGCATTTGGAATTGTCGACTAAGATTCGACCTGACATAGTTTCCTATAGCACTATCATTGATAGCCTCTGTAAAGACAGGTTCTTGCCTCAAGCCCTCGAGCTTTTCTCCGAGATGAAAAGCCAGGGCATTTCACCCAATGTCATCACTTATACTAGCTTAGTTCGAGGGTTGTGCAGTCTGGGACAATGGAAAGATGCTGAGGCGTTGCTAACTGAGATGTTGGACAACAACATAGCTCCCCAGGTTGAGACTTTCAACACCATGATTGACATGCACTGTAAACAAGGCAGGGTGGATGAAGCACATGCCATCCTAGAATACATGCTTCAGAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_165562.p1 GENE.R_Transcript_165562~~R_Transcript_165562.p1 ORF type:3prime_partial len:130 (-),score=20.47,PPR_1|PF12854.3|2.7e-10,PPR_1|PF12854.3|3.4e-11,PPR_1|PF12854.3|2.6e-10,PPR_2|PF13041.2|7.9e-19,PPR_2|PF13041.2|1.6e-07,PPR_2|PF13041.2|3.5e-08,PPR|PF01535.16|5.1e-08,PPR|PF01535.16|2.6e-07,PPR|PF01535.16|2.7e-07,PPR_3|PF13812.2|3.6e-05,PPR_3|PF13812.2|2e-06,PPR_3|PF13812.2|9.8e-07 R_Transcript_165562:3-389(-)
MLKIKPSPPFSTVISLSRHLELSTKIRPDIVSYSTIIDSLCKDRFLPQALELFSEMKSQGISPNVITYTSLVRGLCSLGQWKDAEALLTEMLDNNIAPQVETFNTMIDMHCKQGRVDEAHAILEYMLQR

Click here to download the sequence:
Link to NCBI Protein BLAST