Transcript Information: R_Transcript_165656.p1


Annotated TAIR IDAT1G29195.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 180 Blast hits to 180 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:10202673-10203254 | Reverse length=193
E-Value2.9E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.234967877289
Replicate 216.292211251991
Replicate 322.030523589742
Condition 2: 8 Hour
Replicate 119.802776022909
Replicate 224.682503453112
Replicate 325.293227913654
Condition 3: 24 Hour
Replicate 127.59954967265
Replicate 217.595998896308
Replicate 326.313087601735


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_165656.p1 GENE.R_Transcript_165656~~R_Transcript_165656.p1 ORF type:3prime_partial len:183 (+),score=10.09,DUF4228|PF14009.2|3.4e-33 R_Transcript_165656:343-888(+)
ATGAAGAACACCATAAGGTGCTGTATTTCTTGCATACTCCCATGCGGCGCCCTCGACGTCATCCGTATTGTCCATTCCAACGGCCGCGTCGAGGAGATCACCGGCACCATCAAGGCTTCCGACGTCATGAAAGCTTACCCCAAACACATCCTTAAGAAACCCACACGCCTCCACGACGACTCCCACCACCCCGACCACCACCGCCCCGCCATCGTCGTCGTCCCCCCCGAAGCCCTCCTCCAGCGCGGCAAGATCTACTTCCTCATCCCCGTCTCCTCCTCCTCCTCCTCCTCCCAACCTTCCCCGTCTAAGAAGAAGACACAAAAAATAGTGTCTTCTACCAAGAGGGAGAACAGCAGGAATAATAGTAGTAGTGGTAGAGAAAGTAATAACACGATCTCAGTGAGGGCAAATCTGGTATTTTCGGATCAGTACTTGAGCGAGATATTGAGTGAGAAGGTATCAACGCAAAAGGAGAGAAGAAGAGGGAGAGTTGCTGTTTGGAGGCCCCACTTAGAGAGTATTAGTGAAACCCTCAGTGAAGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_165656.p1 GENE.R_Transcript_165656~~R_Transcript_165656.p1 ORF type:3prime_partial len:183 (+),score=10.09,DUF4228|PF14009.2|3.4e-33 R_Transcript_165656:343-888(+)
MKNTIRCCISCILPCGALDVIRIVHSNGRVEEITGTIKASDVMKAYPKHILKKPTRLHDDSHHPDHHRPAIVVVPPEALLQRGKIYFLIPVSSSSSSSQPSPSKKKTQKIVSSTKRENSRNNSSSGRESNNTISVRANLVFSDQYLSEILSEKVSTQKERRRGRVAVWRPHLESISETLSEA

Click here to download the sequence:
Link to NCBI Protein BLAST