Transcript Information: R_Transcript_165674.p1


Annotated TAIR IDAT1G76640.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28765324-28765803 | Reverse length=159
E-Value1.5E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0261776541979
Replicate 25.7815899697053
Replicate 33.5411381791153
Condition 2: 8 Hour
Replicate 19.1082686035646
Replicate 219.768315830613
Replicate 321.571479287996
Condition 3: 24 Hour
Replicate 14.4362912517303
Replicate 22.8767728987709
Replicate 37.2959015622991


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_165674.p1 GENE.R_Transcript_165674~~R_Transcript_165674.p1 ORF type:complete len:207 (+),score=35.95,EF-hand_8|PF13833.2|0.24,EF-hand_8|PF13833.2|1.2e-10,EF-hand_8|PF13833.2|1.6e-10,EF-hand_1|PF00036.28|2.1e-07,EF-hand_1|PF00036.28|0.032,EF-hand_1|PF00036.28|2.3e+03,EF-hand_1|PF00036.28|3.8e+02,EF-hand_1|PF00036.28|4.5e-08,EF-hand_7|PF13499.2|5.7e-10,EF-hand_7|PF13499.2|2.5e-07,EF-hand_5|PF13202.2|1.3e-07,EF-hand_5|PF13202.2|0.073,EF-hand_5|PF13202.2|2.4e+03,EF-hand_5|PF13202.2|3.4e-05,EF-hand_6|PF13405.2|1.9e-06,EF-hand_6|PF13405.2|0.37,EF-hand_6|PF13405.2|13,EF-hand_6|PF13405.2|0.0055 R_Transcript_165674:152-772(+)
ATGGTGCAGTCGCCCAAGACGGGATTTAGCAGTTTCTGCAAGAAACTAATTCCCAAAAGGAAGGAGAGGATGCTGGAGGTGATGGTGGAAAAGCCGGCCTATTCGTTGTCAGCAACATCAGTGTCATCGTCACCGTGCTCGCCATGGTCGTCATCGGATATTTCAGAGGAGAGAGACTACAGCGGGGAGATAGAGAGAGTGTTCAGGTACATTGATGAGGACGGTGACGGGAAGATATCACCATCAGAGCTCCGGCGGTGCGTGAAGGCGGTAGGAGTACAGAAGCTGACGGCGGAGGAGGCTGAGGCGGCGGTTGAGAGCTCGGATACCGACGGCGATGGGATGCTGAGTTTGGCGGATTTCGAGAGGCTTATGGGTGGTGATGGGGTCACTGAGGAGGACAAAAAAGAAGAGCTCAAAACCGCGTTTTCAATGTACAGTGAAACAAACAAGAAGAATGGGAATGGTGGTGGTATGATAACGCCTAAGAGTTTGAAGAGAATGCTGAGTCGACTCGGCGAGTCTAAGTCTATACAGGATTGTAAAGCTATGATTCGGGTTTATGACCTTAATGGGGATGGGGTTCTTAGCTTTGACGAGTTTGTTACCATGATGGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_165674.p1 GENE.R_Transcript_165674~~R_Transcript_165674.p1 ORF type:complete len:207 (+),score=35.95,EF-hand_8|PF13833.2|0.24,EF-hand_8|PF13833.2|1.2e-10,EF-hand_8|PF13833.2|1.6e-10,EF-hand_1|PF00036.28|2.1e-07,EF-hand_1|PF00036.28|0.032,EF-hand_1|PF00036.28|2.3e+03,EF-hand_1|PF00036.28|3.8e+02,EF-hand_1|PF00036.28|4.5e-08,EF-hand_7|PF13499.2|5.7e-10,EF-hand_7|PF13499.2|2.5e-07,EF-hand_5|PF13202.2|1.3e-07,EF-hand_5|PF13202.2|0.073,EF-hand_5|PF13202.2|2.4e+03,EF-hand_5|PF13202.2|3.4e-05,EF-hand_6|PF13405.2|1.9e-06,EF-hand_6|PF13405.2|0.37,EF-hand_6|PF13405.2|13,EF-hand_6|PF13405.2|0.0055 R_Transcript_165674:152-772(+)
MVQSPKTGFSSFCKKLIPKRKERMLEVMVEKPAYSLSATSVSSSPCSPWSSSDISEERDYSGEIERVFRYIDEDGDGKISPSELRRCVKAVGVQKLTAEEAEAAVESSDTDGDGMLSLADFERLMGGDGVTEEDKKEELKTAFSMYSETNKKNGNGGGMITPKSLKRMLSRLGESKSIQDCKAMIRVYDLNGDGVLSFDEFVTMMG*

Click here to download the sequence:
Link to NCBI Protein BLAST