Transcript Information: R_Transcript_165732.p2


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value5E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6521396258993
Replicate 23.2302000640459
Replicate 31.7620567381656
Condition 2: 8 Hour
Replicate 10.83712358794001
Replicate 20.57335594464578
Replicate 30.62056788445767
Condition 3: 24 Hour
Replicate 10.39244114919152
Replicate 20.18850648624425
Replicate 31.1224463941999


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_165732.p2 GENE.R_Transcript_165732~~R_Transcript_165732.p2 ORF type:complete len:117 (+),score=16.16,zf-RVT|PF13966.2|2.8e-18 R_Transcript_165732:943-1293(+)
ATGCAGGTGAGTAAGATATACGACTGGTTGCTTAACTCTCCAGCAGGTCATTACTGTACAAAAACAATCTGGGATTCAGCTGTTATTCCTAAACATCAAGTGACAGTATGGATGGTCTGGAAAAATGCTTTGCCAACTGTTGATTTGTTGTGTGCTAGGGGAATTATGTTGGTGAACAGATGTGAATTATGTCAGATAGCTCAAGAGACTCATGGTCACTTATTTTTCCAGTGTACTACTGCTTCTGCTGTTTGGAGCAGAGTGCTCAGGTGGCTTGGTTATACTAGAAGAGGGTACAGTTTATGGGGTGAATTGAGGTGGTTTTCTAAGAATGTTAGAGGCAAGGGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_165732.p2 GENE.R_Transcript_165732~~R_Transcript_165732.p2 ORF type:complete len:117 (+),score=16.16,zf-RVT|PF13966.2|2.8e-18 R_Transcript_165732:943-1293(+)
MQVSKIYDWLLNSPAGHYCTKTIWDSAVIPKHQVTVWMVWKNALPTVDLLCARGIMLVNRCELCQIAQETHGHLFFQCTTASAVWSRVLRWLGYTRRGYSLWGELRWFSKNVRGKG*

Click here to download the sequence:
Link to NCBI Protein BLAST