Transcript Information: R_Transcript_165793.p1


Annotated TAIR IDAT5G13770.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4445461-4447290 | Forward length=609
E-Value4.1E-185
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5571246312082
Replicate 21.0945938605653
Replicate 30.94087705766187
Condition 2: 8 Hour
Replicate 10.92837402643584
Replicate 20.95378168990839
Replicate 31.3190743894752
Condition 3: 24 Hour
Replicate 11.5958033460015
Replicate 21.0452729332027
Replicate 31.486842498478


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_165793.p1 GENE.R_Transcript_165793~~R_Transcript_165793.p1 ORF type:complete len:633 (+),score=139.33,PPR_2|PF13041.2|40,PPR_2|PF13041.2|24,PPR_2|PF13041.2|9,PPR_2|PF13041.2|3.5e-08,PPR_2|PF13041.2|0.64,PPR_2|PF13041.2|0.00077,PPR_2|PF13041.2|7.5e-06,PPR_2|PF13041.2|8e-13,PPR_2|PF13041.2|4.7e-12,PPR_2|PF13041.2|0.0062,PPR_2|PF13041.2|0.69,PPR|PF01535.16|7.1e+03,PPR|PF01535.16|2.5e+02,PPR|PF01535.16|28,PPR|PF01535.16|0.0001,PPR|PF01535.16|9.8e+02,PPR|PF01535.16|4.1e+02,PPR|PF01535.16|45,PPR|PF01535.16|4.5e-05,PPR|PF01535.16|9e-08,PPR|PF01535.16|0.00041,PPR|PF01535.16|0.00039,PPR|PF01535.16|20,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|5e+02,PPR_3|PF13812.2|0.0052,PPR_3|PF13812.2|5.8e+03,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|0.0032,PPR_3|PF13812.2|0.00016,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|0.0041,PPR_3|PF13812.2|4.5e+02,PPR_3|PF13812.2|3.5e+02,PPR_1|PF12854.3|12,PPR_1|PF12854.3|0.88,PPR_1|PF12854.3|5e+02,PPR_1|PF12854.3|0.0019,PPR_1|PF12854.3|0.00058,PPR_1|PF12854.3|0.0012,PPR_1|PF12854.3|0.13 R_Transcript_165793:149-2047(+)
ATGGCAATTCCTACATCTTCAGGATTCTCACCACCTAATTGTTTCCACCCACTTCAACATTCCCACAAATTCACAATCTTCAAATCTTTCCAACACATTTTTTCACATAATCAAAGTGCAAATACTAAGTTCATAATAGCTCATTCCTCTGCTTGTCCACCACCTGTACTTGAAGAAGAACCAATACCATCATCCCCTGTTGTTTCTCTTGTTGAGTTGACCTATGGAGTTCCAAATTCTGAGTACTCAGATTCTCCATCTGAAGAGAAAAACATCAACAAACTTGTTAGAGACATGCTTGGTGATCCTAGAACTGAAGATCTTGCATTGGAGTATTACATCAAGGCTAAACAAAGCTCAGAGTTTCTACCTCAGAAAACCACTTTCAAGGATTTGTTGAGGTACTTGTTAAGATCAAAGAAATGGGATTTAGTTTCCATGATTTCTAGAGATATGAAAGCTTACCAAGTTTTCCCTGATGCTACCTTTTGTGCTAGAATTGTTAGTGCTTGCATTAGAGCTAGGAAGTTCAGAATTGCTGATATTCTCCTTGAGAGCTTTGAGAATGATCCTAAGATTGCTGGTTTTGCTTATGTTTCTGCCTATAAGAGTTACAATAAGCTTCATATGTATAAAATTTCGGTTGATTTGTATAATAAAATGAAATCAGCTGAAGTTGTGTTGGATCCTGGGGGGTATAGTTTCATCATGGAAGCTTATATGAAGGTGGCTTATTCCAAGAAAGTCATTGAATTATTCAAGGAACTTGAAGCTAGTGAAAAGATAGATTCTCTAGAGAATCCAACAGAAGTTTATGGGTTGTACTTGGATGCTTTGGGGAAGTCAGGGGAAGGGTTTAAAGCTCTTGAGCTATTTGAGCAAATGCAAGAAAAGGGCATTCCCCCTAATGCCTGGATTTATGCTTCCTTGATCAGCTCATTAGCCGACATGAGAGAAGTTAATATCGTCGAAAAAATTGTTGAACAAGCTGAATCCAAGCAAATGCTGAAGGACCCAGCAATATTCTTGAAGCTAGTGATCATGTATGTCGACCAAGGCTTGATGGAAAGGACTCTAGATGTTGTAAGGACTATGAAATCGGCTAATTTGAAGGTCTCGGATTGTATATTTTGTGCTATTGTTAATGGTTATGCTAAGAAGAGAGGCCTCAAAGCAGCAGCTAGAGTCTACCAACAGCTAACATTGCAAGGGTTCGAGCCAGGGCAAGTGACCTATGCTTCTATCATTAATGTCTACTTTCGCCTTGCATCATTTTCAAAGGCCAAGAAGATTTTTGATGAGATGCAAGAAAGGGGGTTTGAACGCTGTGTTGTGGCATACTCGACTATGATTGTGATGTATGGTAAGATGGGTCAATTGAGAGAAGCAATGAAGCTACTAGCGAAAATGAAGGAGAAAGGGTGCGTGCCTAATGTTTGGGTCTACAACGCACTTATTGACTTACACGGAAGGGCCATGGATTTGAGGCAAGTTGACAAGATATGGAAGGAGATGAAAAGACGGAGAGTGAAGCCTGATCGAGTGAGCTACACTAGCATCATATCAGCTTATTCCAAGTCGCGTGATTTTGAAGCTTGCACCAAATTTTATGAAGAGTATCGACAAAATGGAGGGGGGATTGATGTAGCCATGGCCGGGATTATGGTGGGTGTTTTCTCGAAGATCAATAGAGTTGATGAATTGGTTAAGCTCTTGAGGGATTTGAAGGCTGAGGGGACTAAATTGGATGCAAGACTATACAGGTCTGCCTTAAATGCTTTTAGAGATGCTGGGCTTCAAGTGCAAGCAAGATGGTTGCAGGAGAGTTTTGAGAGGACTTCAGTTGAGCCCTTGAATCCTAACAATGGGAGGCCTAGAAAAAGACCAGTTTTTATCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_165793.p1 GENE.R_Transcript_165793~~R_Transcript_165793.p1 ORF type:complete len:633 (+),score=139.33,PPR_2|PF13041.2|40,PPR_2|PF13041.2|24,PPR_2|PF13041.2|9,PPR_2|PF13041.2|3.5e-08,PPR_2|PF13041.2|0.64,PPR_2|PF13041.2|0.00077,PPR_2|PF13041.2|7.5e-06,PPR_2|PF13041.2|8e-13,PPR_2|PF13041.2|4.7e-12,PPR_2|PF13041.2|0.0062,PPR_2|PF13041.2|0.69,PPR|PF01535.16|7.1e+03,PPR|PF01535.16|2.5e+02,PPR|PF01535.16|28,PPR|PF01535.16|0.0001,PPR|PF01535.16|9.8e+02,PPR|PF01535.16|4.1e+02,PPR|PF01535.16|45,PPR|PF01535.16|4.5e-05,PPR|PF01535.16|9e-08,PPR|PF01535.16|0.00041,PPR|PF01535.16|0.00039,PPR|PF01535.16|20,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|5e+02,PPR_3|PF13812.2|0.0052,PPR_3|PF13812.2|5.8e+03,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|0.0032,PPR_3|PF13812.2|0.00016,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|0.0041,PPR_3|PF13812.2|4.5e+02,PPR_3|PF13812.2|3.5e+02,PPR_1|PF12854.3|12,PPR_1|PF12854.3|0.88,PPR_1|PF12854.3|5e+02,PPR_1|PF12854.3|0.0019,PPR_1|PF12854.3|0.00058,PPR_1|PF12854.3|0.0012,PPR_1|PF12854.3|0.13 R_Transcript_165793:149-2047(+)
MAIPTSSGFSPPNCFHPLQHSHKFTIFKSFQHIFSHNQSANTKFIIAHSSACPPPVLEEEPIPSSPVVSLVELTYGVPNSEYSDSPSEEKNINKLVRDMLGDPRTEDLALEYYIKAKQSSEFLPQKTTFKDLLRYLLRSKKWDLVSMISRDMKAYQVFPDATFCARIVSACIRARKFRIADILLESFENDPKIAGFAYVSAYKSYNKLHMYKISVDLYNKMKSAEVVLDPGGYSFIMEAYMKVAYSKKVIELFKELEASEKIDSLENPTEVYGLYLDALGKSGEGFKALELFEQMQEKGIPPNAWIYASLISSLADMREVNIVEKIVEQAESKQMLKDPAIFLKLVIMYVDQGLMERTLDVVRTMKSANLKVSDCIFCAIVNGYAKKRGLKAAARVYQQLTLQGFEPGQVTYASIINVYFRLASFSKAKKIFDEMQERGFERCVVAYSTMIVMYGKMGQLREAMKLLAKMKEKGCVPNVWVYNALIDLHGRAMDLRQVDKIWKEMKRRRVKPDRVSYTSIISAYSKSRDFEACTKFYEEYRQNGGGIDVAMAGIMVGVFSKINRVDELVKLLRDLKAEGTKLDARLYRSALNAFRDAGLQVQARWLQESFERTSVEPLNPNNGRPRKRPVFI*

Click here to download the sequence:
Link to NCBI Protein BLAST