Transcript Information: R_Transcript_165803.p1


Annotated TAIR IDAT5G02710.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0153 (InterPro:IPR005358); Has 240 Blast hits to 240 proteins in 73 species: Archae - 10; Bacteria - 110; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:612628-613480 | Forward length=176
E-Value7E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21601137224519
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.21481196000458
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.7770782729076


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_165803.p1 GENE.R_Transcript_165803~~R_Transcript_165803.p1 ORF type:complete len:169 (+),score=41.88,CxxCxxCC|PF03692.11|8.9e-06,CxxCxxCC|PF03692.11|7.1e+02 R_Transcript_165803:379-885(+)
ATGATCTTGCAAGCCATAGGCATAGGAGGAGCAGGTGGCAGTGTGACAAGCTTGTGTTCAGTGAGATGCAGGGCAAACTCAAAGCCAAGCCCAAAGGGGAAGGGCAAAACTGTCAAAGTGGTGAAGATAGAGGAAGGAAAGCAAGGAAATGGTGGAGGGTTTGGACAGCAGCAGAAGAAGGAACCACTTTGGCAGTGTGTTAAGGGATGTGGGGCCTGCTGTAAGCTTGCCAAGGACCCCACTTTTGCTACCCCTGAAGAGATTTTTGACAACCCTTCTGATATTCAGCATTATAAAAGCTTAATAGGAGCAGATGGATGGTGCATACACTATGATAAAAGCACTAGGACATGCTCCATCTACGATGATGTATTTCAGAATTTATATGGAATCAACAAGAAGAGATTCAACAAGGAGGCTTGCAGTTGTTGTAATGACACAATCAAAGCAATCTATGGACCTGATTCAGAAGAGCTGGAGAGGTTCAACAAGGCAATTCGAAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_165803.p1 GENE.R_Transcript_165803~~R_Transcript_165803.p1 ORF type:complete len:169 (+),score=41.88,CxxCxxCC|PF03692.11|8.9e-06,CxxCxxCC|PF03692.11|7.1e+02 R_Transcript_165803:379-885(+)
MILQAIGIGGAGGSVTSLCSVRCRANSKPSPKGKGKTVKVVKIEEGKQGNGGGFGQQQKKEPLWQCVKGCGACCKLAKDPTFATPEEIFDNPSDIQHYKSLIGADGWCIHYDKSTRTCSIYDDVFQNLYGINKKRFNKEACSCCNDTIKAIYGPDSEELERFNKAIRS*

Click here to download the sequence:
Link to NCBI Protein BLAST