Transcript Information: R_Transcript_165804.p1


Annotated TAIR IDAT5G02710.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0153 (InterPro:IPR005358); Has 240 Blast hits to 240 proteins in 73 species: Archae - 10; Bacteria - 110; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:612628-613480 | Forward length=176
E-Value1.6E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6512680716351
Replicate 20.46919107075526
Replicate 31.9195590164374
Condition 2: 8 Hour
Replicate 11.0943403328378
Replicate 20.74952676562633
Replicate 32.028112918479
Condition 3: 24 Hour
Replicate 11.2825590630002
Replicate 21.4785648418264
Replicate 31.1004991183356


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_165804.p1 GENE.R_Transcript_165804~~R_Transcript_165804.p1 ORF type:complete len:179 (+),score=40.83,CxxCxxCC|PF03692.11|5.3e-09,CxxCxxCC|PF03692.11|1.1e+03 R_Transcript_165804:379-915(+)
ATGATCTTGCAAGCCATAGGCATAGGAGGAGCAGGTGGCAGTGTGACAAGCTTGTGTTCAGTGAGATGCAGGGCAAACTCAAAGCCAAGCCCAAAGGGGAAGGGCAAAACTGTCAAAGTGGTGAAGATAGAGGAAGGAAAGCAAGGAAATGGTGGAGGGTTTGGACAGCAGCAGAAGAAGGAACCACTTTGGCAGTGTGTTAAGGGATGTGGGGCCTGCTGTAAGCTTGCCAAGGACCCCACTTTTGCTACCCCTGAAGAGATTTTTGACAACCCTTCTGATATTCAGCATTATAAAAGCTTAATAGGAGCAGATGGATGGTGCATACACTATGATAAAAGCACTAGGACATGCTCCATCTACGATGATCGGCCTTATTTTTGTTGCGTGGAGCCAGATGTATTTCAGAATTTATATGGAATCAACAAGAAGAGATTCAACAAGGAGGCTTGCAGTTGTTGTAATGACACAATCAAAGCAATCTATGGACCTGATTCAGAAGAGCTGGAGAGGTTCAACAAGGCAATTCGAAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_165804.p1 GENE.R_Transcript_165804~~R_Transcript_165804.p1 ORF type:complete len:179 (+),score=40.83,CxxCxxCC|PF03692.11|5.3e-09,CxxCxxCC|PF03692.11|1.1e+03 R_Transcript_165804:379-915(+)
MILQAIGIGGAGGSVTSLCSVRCRANSKPSPKGKGKTVKVVKIEEGKQGNGGGFGQQQKKEPLWQCVKGCGACCKLAKDPTFATPEEIFDNPSDIQHYKSLIGADGWCIHYDKSTRTCSIYDDRPYFCCVEPDVFQNLYGINKKRFNKEACSCCNDTIKAIYGPDSEELERFNKAIRS*

Click here to download the sequence:
Link to NCBI Protein BLAST