Transcript Information: R_Transcript_165916.p1


Annotated TAIR IDAT5G50260.1
Annotated Gene NameCysteine proteinases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20455605-20456862 | Forward length=361
E-Value3.3E-81
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2631237108698
Replicate 21.9321748849354
Replicate 34.7780925047189
Condition 2: 8 Hour
Replicate 13.3048406677264
Replicate 23.9783164011925
Replicate 35.7906978666265
Condition 3: 24 Hour
Replicate 16.197199497049
Replicate 24.4651751128163
Replicate 35.3712158740852


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_165916.p1 GENE.R_Transcript_165916~~R_Transcript_165916.p1 ORF type:complete len:163 (+),score=33.79,Peptidase_C1|PF00112.19|6e-47 R_Transcript_165916:243-731(+)
ATGGAATATGCTTTTGACTACATCAAGAAAACTGGTGGGGTCACTGCCGAAAACACCTACCCTTATGCTGCTAAAGATGAAGCTTGCAACTCTGCAAAGAAAAACATGCCTATAGTGAAGATTGATGGTTATGAAGTGGTGCCTGAAAATGACGAGAATGCCTTGATGAAAGCTGTCGCAAATCAACCTGTTTCTGTCTCTATTGACGCAAGCGGCTATGACTTACAGTTCTATTCTGAGGGAGTTTTTACCGGATCATGTGGAACTGATTTAGACCATGGAGTAACAGCTGTAGGGTACGGAGCAACACAGGACGGAACAAAGTATTGGATAGTGAAGAACTCATGGGGTCTCGGGTGGGGGGAAAAGGGCTACATTCGTATGCAACGAGGCATTAATGTTAAGGAAGGGCTTTGTGGCATTGCTATGGATGCTTGCTATCCTACCAAATTGAGCTCTGACAACCCTCATGCTAAAGATGAACTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_165916.p1 GENE.R_Transcript_165916~~R_Transcript_165916.p1 ORF type:complete len:163 (+),score=33.79,Peptidase_C1|PF00112.19|6e-47 R_Transcript_165916:243-731(+)
MEYAFDYIKKTGGVTAENTYPYAAKDEACNSAKKNMPIVKIDGYEVVPENDENALMKAVANQPVSVSIDASGYDLQFYSEGVFTGSCGTDLDHGVTAVGYGATQDGTKYWIVKNSWGLGWGEKGYIRMQRGINVKEGLCGIAMDACYPTKLSSDNPHAKDEL*

Click here to download the sequence:
Link to NCBI Protein BLAST