Transcript Information: R_Transcript_166137.p2


Annotated TAIR IDAT5G46860.1
Annotated Gene NameSyntaxin/t-SNARE family protein
Annotated Gene Symbol(s)VAM3, ATVAM3, SYP22, ATSYP22, SGR3
Annotation TypeHomolog
Chromosome Positionchr5:19012342-19013795 | Reverse length=268
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.43459430844568
Replicate 20.49991191467376
Replicate 30.27269925709705
Condition 2: 8 Hour
Replicate 10.29149839222911
Replicate 20
Replicate 30.21609060262365
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 31.3028395646963


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_166137.p2 GENE.R_Transcript_166137~~R_Transcript_166137.p2 ORF type:5prime_partial len:84 (+),score=18.26 R_Transcript_166137:1-252(+)
CAAAAGGCTCAACGTCTATCAGCTGAGAGGGAAACTGCATATACCCCTTTTGTTCCCCAGGCTGTTCTTCCTTCAAGGTCAAAGAAAGAAGGAAGAGCTTCCTTCGTTGGAGAGGGACCTTCGAATGGCTATTGTAGCAGTTGTTTGTCAGGGGGGGTGACGGTCGAGGTTGGAATGTTAATAAGATTGAAGGGGATGGGGTATGCTGCACCACATAAACAAGGGAAGGATAGGCAATTTTGGGGCTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_166137.p2 GENE.R_Transcript_166137~~R_Transcript_166137.p2 ORF type:5prime_partial len:84 (+),score=18.26 R_Transcript_166137:1-252(+)
QKAQRLSAERETAYTPFVPQAVLPSRSKKEGRASFVGEGPSNGYCSSCLSGGVTVEVGMLIRLKGMGYAAPHKQGKDRQFWGS*

Click here to download the sequence:
Link to NCBI Protein BLAST