Transcript Information: R_Transcript_166446.p1


Annotated TAIR ID
Annotated Gene Name
Annotated Gene Symbol(s)
Annotation Type
Chromosome Position
E-Value
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.50283638993716
Replicate 20.69409257574539
Replicate 30.18931188095994
Condition 2: 8 Hour
Replicate 13.5076170172362
Replicate 24.9280180366249
Replicate 34.3503860164564
Condition 3: 24 Hour
Replicate 10.63244648010204
Replicate 21.0328909122309
Replicate 30.60296707126439


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_166446.p1 GENE.R_Transcript_166446~~R_Transcript_166446.p1 ORF type:3prime_partial len:363 (+),score=65.18,gag_pre-integrs|PF13976.2|1.7e-07 R_Transcript_166446:595-1680(+)
ATGGGACACTTGCAACAGTATGAGGAGCAATTTGCTGTTAATCTGCAACAAGAAGAGACTCAGAGAGATGTGCTGAGCAATATAAGTGTAGAAGCTGAACCATCTGCACTGTACAGTAAGGGGGAGGCTACTTTCAAATGTACTGGATGTGGAAGATCAGGTCATACAAGGGATAGATGCTGGGCTGAGCATGGCTATCCATCTTGGCATCCTTTGGCCAAGAAACTTCCTCAAAGAGCTAGAGGGAAAGAAAACACAAATTTCAGAAGCAATTTTAATTCAGCTCAAAACAGAAATGTTGTGCATAAGCAGAAGCCATATAGACAGACTGCCAATGCTGTACAAATTGAACCTGTTAACTCAGGACCTGTGTTTACACAACAACAACTTTATCAAATCATGAAGCAACTTCCAAGCACATCCAAAGGTAGCAAACCAGATTCAGATGATGAACTGGAAGCTGGATTTGCATGTATGTTGTTCTGTAATAGTGCTGCTTCTTTTCCAAATGAATGGATATTAGATTCTGGTGCTTCTGATCATATGACTGCTACTTTTTCCAATCTAAAATATCCAAAATCTTCCATTGCACTTCCCAAAATAAATTTACCTAATGGTACAACCTCTACCATTAGTCATACTGGATCTGTAATGCTTGAGAATGACATCACATTGTCTGATGTGTTATTTGTGCCTACTTTCGAGCATAATTTGCTGTCTATTCAAAAACTCACAGCCACAAATCGTTGTTATGTGTCCTTTCATCCTGACTTTTGTCTAATTCAGGATTGTGCTACTCATAAGATTAAAGCAGTGGGTAAATCTTCCGGAGGTCTTTACTATCTTGTCAATGAACCTTTGGATCAAATTGAGCTAGCTCAGATTTTGGATAACAAACAATTTTCAGTATCATCTCCTGTAATAAAGTTTTCCTGTAATGCTAGTTCTTCAGCAGTTAAATCTGTAACTCTCTGGCATAACAAGTTAGGACATATGCCTGTCCATAGATTGAAATACATTCAAAATGTTTCTGTTGAATCAAATTGTAAAATTCCAGTATGTGTTACTTGTCCTATGGCAAAGTTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_166446.p1 GENE.R_Transcript_166446~~R_Transcript_166446.p1 ORF type:3prime_partial len:363 (+),score=65.18,gag_pre-integrs|PF13976.2|1.7e-07 R_Transcript_166446:595-1680(+)
MGHLQQYEEQFAVNLQQEETQRDVLSNISVEAEPSALYSKGEATFKCTGCGRSGHTRDRCWAEHGYPSWHPLAKKLPQRARGKENTNFRSNFNSAQNRNVVHKQKPYRQTANAVQIEPVNSGPVFTQQQLYQIMKQLPSTSKGSKPDSDDELEAGFACMLFCNSAASFPNEWILDSGASDHMTATFSNLKYPKSSIALPKINLPNGTTSTISHTGSVMLENDITLSDVLFVPTFEHNLLSIQKLTATNRCYVSFHPDFCLIQDCATHKIKAVGKSSGGLYYLVNEPLDQIELAQILDNKQFSVSSPVIKFSCNASSSAVKSVTLWHNKLGHMPVHRLKYIQNVSVESNCKIPVCVTCPMAKF

Click here to download the sequence:
Link to NCBI Protein BLAST