Transcript Information: R_Transcript_166471.p2


Annotated TAIR IDAT5G11580.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3718913-3721125 | Forward length=553
E-Value2.4E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24666163452323
Replicate 20.14186689470472
Replicate 30.61910101611223
Condition 2: 8 Hour
Replicate 10.16544503342733
Replicate 20
Replicate 30.98116814164254
Condition 3: 24 Hour
Replicate 10.15512031910611
Replicate 20.59608807812371
Replicate 30.14788989653309


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_166471.p2 GENE.R_Transcript_166471~~R_Transcript_166471.p2 ORF type:5prime_partial len:148 (+),score=21.61,RCC1|PF00415.14|0.12,RCC1|PF00415.14|1.1e-14,RCC1|PF00415.14|35,RCC1_2|PF13540.2|1e-09,RCC1_2|PF13540.2|4e-08 R_Transcript_166471:2-445(+)
TGCTCTCTGGTCTCTAGTGTATTTCTATTCCCTGGCCCTCAGGCACGAAAAAAAGAAAAAATAACAGTAACCCAAACAGAGCCACATAATCAATTCATGGCTGGCCGGAACCCTAGTATGAAGGTCGTAGCAGTCGCCGCCGGCGAGGCTCACACTCTCGCTCTCACCGGAGACGGAAAGGTTTACTCATGGGGCAGAGGTACTTTTGGCCGTTTGGGTAACGGGTCTGATTCTGATGAGAATTATCCGGTGCCCGTCAAATTTGATCATATTAATAATAATAATGGTGGTGGTACAGCTCTCAAGTTTGTTGGGGTTGCTTCTGGTGCTTATCACAGCCTTGCTGTTGCTGATGATGGAACTGTCTGGTGCTGGGGCTACAACATGTGTATGTTCTCTTACAACTTTTTCTATGGTGTCAACTTGTTTGGGACTAAGGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_166471.p2 GENE.R_Transcript_166471~~R_Transcript_166471.p2 ORF type:5prime_partial len:148 (+),score=21.61,RCC1|PF00415.14|0.12,RCC1|PF00415.14|1.1e-14,RCC1|PF00415.14|35,RCC1_2|PF13540.2|1e-09,RCC1_2|PF13540.2|4e-08 R_Transcript_166471:2-445(+)
CSLVSSVFLFPGPQARKKEKITVTQTEPHNQFMAGRNPSMKVVAVAAGEAHTLALTGDGKVYSWGRGTFGRLGNGSDSDENYPVPVKFDHINNNNGGGTALKFVGVASGAYHSLAVADDGTVWCWGYNMCMFSYNFFYGVNLFGTKA*

Click here to download the sequence:
Link to NCBI Protein BLAST