Transcript Information: R_Transcript_166474.p1


Annotated TAIR IDAT5G11580.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3718913-3721125 | Forward length=553
E-Value7E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.651692475647
Replicate 27.0392221048861
Replicate 37.8121243825028
Condition 2: 8 Hour
Replicate 18.7752810793595
Replicate 27.3674581788877
Replicate 39.0233440078224
Condition 3: 24 Hour
Replicate 19.5546943375416
Replicate 25.9918911436829
Replicate 38.7297781699186


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_166474.p1 GENE.R_Transcript_166474~~R_Transcript_166474.p1 ORF type:5prime_partial len:173 (-),score=38.48 R_Transcript_166474:192-710(-)
CCGCAGCAAGGACAGTGTGGGCGAGGAAGAAGTGGAGTTCTCGGAACTGGAAATTTGGATGATTCTTACTCTCCCACAATGGTTTTGTGGCCCCCAATGTCGGAGGATCTCAGAGAAGGGTTGCCTTCTACTAGTGAGGAGTACAAGAAGCCCGAGAATACATGTGCAAAAGGTGAGGTGACAGAGGCGGAGAAACAGCTATCCTCTGCAATGGAGGAGATGAAGCTTTTGCAATCAAAACTTGTGACAATGGAACGTTATGCTAGCATTCTTCATGGTGCAATCTATGGCAGGCCGTTCGAGGTACAAGACATTCCAGCCTCATTGCATGAATCTGGTAGTTTCAACATCGCGAAAGAATGGGAGAATATGTTGGAGTCTGCAGATCATGCTAAGCTAATGCGTCTAGAGATGTTTTACAAAAACATGCTGGCAGGAGTCAAGGATAAACTAATGAAGAGGAGGATCCAAGACATCATACTGGAGTGCTTGCAATCTTCTACCACTCGCCCTAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_166474.p1 GENE.R_Transcript_166474~~R_Transcript_166474.p1 ORF type:5prime_partial len:173 (-),score=38.48 R_Transcript_166474:192-710(-)
PQQGQCGRGRSGVLGTGNLDDSYSPTMVLWPPMSEDLREGLPSTSEEYKKPENTCAKGEVTEAEKQLSSAMEEMKLLQSKLVTMERYASILHGAIYGRPFEVQDIPASLHESGSFNIAKEWENMLESADHAKLMRLEMFYKNMLAGVKDKLMKRRIQDIILECLQSSTTRPN*

Click here to download the sequence:
Link to NCBI Protein BLAST