Transcript Information: R_Transcript_166546.p2


Annotated TAIR IDAT4G33480.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3727 (InterPro:IPR022203); Has 348 Blast hits to 348 proteins in 78 species: Archae - 0; Bacteria - 101; Metazoa - 0; Fungi - 0; Plants - 183; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:16105804-16108497 | Reverse length=336
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6009242699785
Replicate 21.856815683074
Replicate 33.5840473789898
Condition 2: 8 Hour
Replicate 13.6645512165945
Replicate 23.498641376512
Replicate 32.3461265427711
Condition 3: 24 Hour
Replicate 13.9043889843034
Replicate 23.60085859438
Replicate 34.6157744577811


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_166546.p2 GENE.R_Transcript_166546~~R_Transcript_166546.p2 ORF type:complete len:147 (+),score=36.93 R_Transcript_166546:192-632(+)
ATGGCCTTATCCCTTTCCTCAATATCTCATACACCCCCACTTCATCACAATCACCCCTCTAAAACCCTCCAACTATCTCCCTCCACAATCTCCATAACCCCCTTTAAACCTTTCCCTTTGACCCACCAAAAATGGGGCCCTGTTGTATGCTTAGCTGCTAAGCAACAAAGTGGGTCAGTCAAACCCAACAAGAAGAGAAGAAAAAAGGGTGGTTCTGGGCCTAAAGACTTGAGCTTGGAGGGTTTTGAGATTGTAGAAGAGATTGAAAGAAAAAGGGAGAGGTCTAGTAATAGTAGCAGTAGTAGTAAGTCTAAGAGGTCTGAAGCTTATATACCTTTGCCATTGCCTAAGCCACCTGCTGGGTTTGTGGTTGATGAACAAGGCCGTGTTCTTATGGCTGCCTCCAAGAGAATTGCTACTATTGTTGAGTTCCCCTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_166546.p2 GENE.R_Transcript_166546~~R_Transcript_166546.p2 ORF type:complete len:147 (+),score=36.93 R_Transcript_166546:192-632(+)
MALSLSSISHTPPLHHNHPSKTLQLSPSTISITPFKPFPLTHQKWGPVVCLAAKQQSGSVKPNKKRRKKGGSGPKDLSLEGFEIVEEIERKRERSSNSSSSSKSKRSEAYIPLPLPKPPAGFVVDEQGRVLMAASKRIATIVEFPF*

Click here to download the sequence:
Link to NCBI Protein BLAST