Transcript Information: R_Transcript_166547.p2


Annotated TAIR IDAT4G33480.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3727 (InterPro:IPR022203); Has 348 Blast hits to 348 proteins in 78 species: Archae - 0; Bacteria - 101; Metazoa - 0; Fungi - 0; Plants - 183; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:16105804-16108497 | Reverse length=336
E-Value1.3E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.2474992026089
Replicate 214.666533379032
Replicate 37.579435234021
Condition 2: 8 Hour
Replicate 19.5422856044411
Replicate 212.166950413586
Replicate 315.482256117389
Condition 3: 24 Hour
Replicate 112.491748050368
Replicate 28.1085510627122
Replicate 39.3344622929415


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_166547.p2 GENE.R_Transcript_166547~~R_Transcript_166547.p2 ORF type:complete len:136 (+),score=31.29,DUF3727|PF12527.4|4.8e-20 R_Transcript_166547:915-1322(+)
ATGTTGCGAATTTTTTTCTCCAATTGTCATCACTCTCTGTCATATTGGCTTATTGTTTCCAAGTTTAGGTTTTGTTATACAGCTCGTGGAGGATTTTGCTACTCAGAAGATAACATATTTGAATTCCGATCAGATGATGGACAAGATGTAGATGGTGTACCAACAGAAGGTGTTGAAATTACTTGCTTCCACATGGATGGAGCTCATTATATGATTTACACGCCATCTGATCCACTTCTCTTTGTTGCTGTTAAGGACAATGACGGCCAGTTGCGAATTGCTGATGATGATCTCTTGGATGACCCTGCCGTTGTAAGTGCAATAGATGAGGAGACAGAATTTAACGCATTGGTGGAGGAAGAGGCTGCTCTTTTGGAATCAGTTTTTGGTACAGATACAGACAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_166547.p2 GENE.R_Transcript_166547~~R_Transcript_166547.p2 ORF type:complete len:136 (+),score=31.29,DUF3727|PF12527.4|4.8e-20 R_Transcript_166547:915-1322(+)
MLRIFFSNCHHSLSYWLIVSKFRFCYTARGGFCYSEDNIFEFRSDDGQDVDGVPTEGVEITCFHMDGAHYMIYTPSDPLLFVAVKDNDGQLRIADDDLLDDPAVVSAIDEETEFNALVEEEAALLESVFGTDTDR*

Click here to download the sequence:
Link to NCBI Protein BLAST