Transcript Information: R_Transcript_166548.p1


Annotated TAIR IDAT4G33480.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3727 (InterPro:IPR022203); Has 348 Blast hits to 348 proteins in 78 species: Archae - 0; Bacteria - 101; Metazoa - 0; Fungi - 0; Plants - 183; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:16105804-16108497 | Reverse length=336
E-Value2.2E-137
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.2236558980466
Replicate 23.7397990563381
Replicate 34.8378097213248
Condition 2: 8 Hour
Replicate 15.3582299884557
Replicate 25.2346084717279
Replicate 36.0505368734623
Condition 3: 24 Hour
Replicate 15.491180354718
Replicate 27.4639934667857
Replicate 37.2402076572434


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_166548.p1 GENE.R_Transcript_166548~~R_Transcript_166548.p1 ORF type:5prime_partial len:393 (+),score=78.04,DUF3727|PF12527.4|3.6e-22 R_Transcript_166548:2-1180(+)
CTACCTAGTGTCGTAACTTGCCACTACCCAGTACCCACTATACTGTCAACAGCCCGTTATACCGCTGCAAAATCTTCTAATCCCTTCCATTCCACCATAACCAAAACACAAACACAAATCTCAAATCTTTGCAAAACCCCATTTCAATTCACACTCAAATTTCACAATCCAATACTCAAAAAAACAAATATGGCCTTATCCCTTTCCTCAATATCTCATACACCCCCACTTCATCACAATCACCCCTCTAAAACCCTCCAACTATCTGCCTGCACAATCTCCATAACCCCCCTTAAACCCTTCCCTTTGACCCACCAAAAATGGGGCCCTGTTGTATGCTTAGCTGCTAAGCAACAAAGTGGGTCAGTCAAACCCAACAAGAAGAGAAGAAAAAAGGGTGGTTCTGGGCCTAAAGACTTGAGCTTGGAGGGTTTTGAGATTGTAGAAGAGATTGAAAGAGAAAGAGAGAGGTCTAGTAATAATAGTAGTAGTAGTAATTCTAAGAGGTCTGAAGCTTATATACCTTTGCCATTGCCTAAGCCACCTGCTGGGTTTGTGGTTGATGAACAAGGCCGTGTTCTTATGGCTGCCTCCAAGAGAATTGCTACTATTGTTGATCCTACCAATAACCTTCCACTGGAGTGCATGATAAGGAGAGTATTTACAAACTCTAAAGGGGATGACTGTATGTTGCTGTGCCCAGTTGATACGCCTGTTCAGATTTTGAAAAGCACGAATATCGAAGGATGGTCAGCTGTTAATGATGATGAAGTTGAATCTCTCCTTCCCACTGCAGCTTATGCCCTTGCTAAGATACATATGCATTTGGTACATAGTGGGTTTTGTTATACAGCTCGTGGAGGATTTTGCTACTCAGAAGATAACATATTTGAATTCCGATCAGATGATGGACAAGATGTAGATGGTGTACCAACAGAAGGTGTTGAAATTACTTGCTTCCACATGGATGGAGCTCATTATATGATTTACACGCCATCTGATCCACTTCTCTTTGTTGCTGTTAAGGACAATGACGGCCAGTTGCGAATTGCTGATGATGATCTCTTGGATGACCCTGCCGTTGTAAGTGCAATAGATGAGGAGACAGAATTTAACGCATTGGTGGAGGAAGAGGCTGCTCTTTTGGAATCAGTTTTTGGTACAGATACAGACAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_166548.p1 GENE.R_Transcript_166548~~R_Transcript_166548.p1 ORF type:5prime_partial len:393 (+),score=78.04,DUF3727|PF12527.4|3.6e-22 R_Transcript_166548:2-1180(+)
LPSVVTCHYPVPTILSTARYTAAKSSNPFHSTITKTQTQISNLCKTPFQFTLKFHNPILKKTNMALSLSSISHTPPLHHNHPSKTLQLSACTISITPLKPFPLTHQKWGPVVCLAAKQQSGSVKPNKKRRKKGGSGPKDLSLEGFEIVEEIERERERSSNNSSSSNSKRSEAYIPLPLPKPPAGFVVDEQGRVLMAASKRIATIVDPTNNLPLECMIRRVFTNSKGDDCMLLCPVDTPVQILKSTNIEGWSAVNDDEVESLLPTAAYALAKIHMHLVHSGFCYTARGGFCYSEDNIFEFRSDDGQDVDGVPTEGVEITCFHMDGAHYMIYTPSDPLLFVAVKDNDGQLRIADDDLLDDPAVVSAIDEETEFNALVEEEAALLESVFGTDTDR*

Click here to download the sequence:
Link to NCBI Protein BLAST