Transcript Information: R_Transcript_166578.p1


Annotated TAIR IDAT1G55020.1
Annotated Gene Namelipoxygenase 1
Annotated Gene Symbol(s)LOX1, ATLOX1
Annotation TypeOrtholog
Chromosome Positionchr1:20525798-20530143 | Forward length=859
E-Value2.6E-112
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1487877523949
Replicate 20.80755001601146
Replicate 31.4416827857718
Condition 2: 8 Hour
Replicate 12.1403728100739
Replicate 22.1109923416504
Replicate 31.7136135900365
Condition 3: 24 Hour
Replicate 12.2476174908242
Replicate 21.3109769270623
Replicate 32.1428522071088


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_166578.p1 GENE.R_Transcript_166578~~R_Transcript_166578.p1 ORF type:3prime_partial len:286 (+),score=40.27,Lipoxygenase|PF00305.15|8.3e-34,PLAT|PF01477.19|4.6e-19 R_Transcript_166578:344-1198(+)
ATGGGATTTTGTCCAAACACGAAGTTGATCGAGAAAGCTGCTTCGAAGATGGTTTGTGGGCGGAGCAGGTTCCGTAGTGTTGATAATGGCTACAGCCATTACAGCACAGACAATAACGATACAGAGAAGCAAAAAGACAATGGGAAAAACCAGATTAAAGGGACAGTTGTGTTGATGAAGAAGAATGTTCTGGATTTTAATGATGTCCCAGCTTCTCTGTTTGATCGCTTTCATGAGCTTCTTGGTAAAGGTGTCTCCCTTCAGCTCATTAGTGCTCATAACTCCCAACCAGCAAAGGAGTTAGAAGGGAAGCTGGGGAAGGCAGCGTACCTGGAAAAATGGGTTAAAACAATGCCATCATTAACTGCTGGGGAGACGACATTCAATATCACACTCGACTGGCACGAAAGTTTGGGTGTCCCAGACGCTTTTATCATTAAGAATCAACACCACAGTCAGTTCTACCTCAGAACTGTAACATTGGACGTTCCTGGACACGGTCGTGTGCATTTCATCTGCAATTCCTGGGTGTATCCAGCTCACCGTTACAAGTACAATCGAGTCTTCTTCTCTAACAAGACCTTCCTTCCTCATCAGACACCAGGAGCGCTGCGCAAATACAGGGAGGAAGAACTTGTGAATCTACGAGGAGATGGAAAAGGAAAGCTGAAGGAATGGGACAGGGTATACGACTATGATTATTACAATGATCTAGGAATGCCAGACAAGGGGAAAGATTATGCACGTCCTGTTCTCGGGGGATCAAGCGAGTACCCTTATCCTCGCAGAGGGAGAACAGGTCGCAAACCAACAAGAACTGATCCAAACACAGAGAGCCGGTTACCACTTCTAAGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_166578.p1 GENE.R_Transcript_166578~~R_Transcript_166578.p1 ORF type:3prime_partial len:286 (+),score=40.27,Lipoxygenase|PF00305.15|8.3e-34,PLAT|PF01477.19|4.6e-19 R_Transcript_166578:344-1198(+)
MGFCPNTKLIEKAASKMVCGRSRFRSVDNGYSHYSTDNNDTEKQKDNGKNQIKGTVVLMKKNVLDFNDVPASLFDRFHELLGKGVSLQLISAHNSQPAKELEGKLGKAAYLEKWVKTMPSLTAGETTFNITLDWHESLGVPDAFIIKNQHHSQFYLRTVTLDVPGHGRVHFICNSWVYPAHRYKYNRVFFSNKTFLPHQTPGALRKYREEELVNLRGDGKGKLKEWDRVYDYDYYNDLGMPDKGKDYARPVLGGSSEYPYPRRGRTGRKPTRTDPNTESRLPLLS

Click here to download the sequence:
Link to NCBI Protein BLAST