Transcript Information: R_Transcript_166662.p1


Annotated TAIR IDAT1G14790.1
Annotated Gene NameRNA-dependent RNA polymerase 1
Annotated Gene Symbol(s)RDR1, ATRDRP1
Annotation TypeHomolog
Chromosome Positionchr1:5094317-5097817 | Reverse length=1107
E-Value1E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9435102585697
Replicate 22.1871146266977
Replicate 31.9088947996794
Condition 2: 8 Hour
Replicate 13.5708553048066
Replicate 24.1926653452223
Replicate 37.3740918145322
Condition 3: 24 Hour
Replicate 15.739451806926
Replicate 22.9866496414323
Replicate 37.0679046384773


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_166662.p1 GENE.R_Transcript_166662~~R_Transcript_166662.p1 ORF type:5prime_partial len:96 (-),score=17.87,RdRP|PF05183.8|6e-28 R_Transcript_166662:77-364(-)
GGTAGAGCAATGATGGGATGTCTTGATGAAACTAAAGCCTTGGAATATGGTCAGGTCTTTGTTCAAGTATCTGGAGCAAGATTTAGGAATGTTGGTAATGAACTCCTTACACACGTTGGCACTGAATATGAACCATGTAATTATGTTGTGAAAGGAAAAGTAGTTGTTGCCAAGAACCCTTGTCTGCATCCTGGTGATGTGCGTGTCCTTATGGCCGTAGATGTGCCTTCTTTGCATCACATGGTTGACTGTGTTATCTTTCCTCAGAAAGGGAACAGGTACGTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_166662.p1 GENE.R_Transcript_166662~~R_Transcript_166662.p1 ORF type:5prime_partial len:96 (-),score=17.87,RdRP|PF05183.8|6e-28 R_Transcript_166662:77-364(-)
GRAMMGCLDETKALEYGQVFVQVSGARFRNVGNELLTHVGTEYEPCNYVVKGKVVVAKNPCLHPGDVRVLMAVDVPSLHHMVDCVIFPQKGNRYV*

Click here to download the sequence:
Link to NCBI Protein BLAST