Transcript Information: R_Transcript_166702.p1


Annotated TAIR IDAT1G51680.1
Annotated Gene Name4-coumarate:CoA ligase 1
Annotated Gene Symbol(s)4CL1, 4CL.1, AT4CL1
Annotation TypeOrtholog
Chromosome Positionchr1:19159007-19161464 | Reverse length=561
E-Value3.4E-271
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 183.938136327546
Replicate 258.848269578664
Replicate 365.841879268522
Condition 2: 8 Hour
Replicate 162.005218217195
Replicate 283.004529975919
Replicate 394.559437525053
Condition 3: 24 Hour
Replicate 1102.36858196646
Replicate 267.974846772704
Replicate 388.773168747556


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_166702.p1 GENE.R_Transcript_166702~~R_Transcript_166702.p1 ORF type:complete len:573 (+),score=51.39,AMP-binding|PF00501.24|6.4e-110,AMP-binding_C|PF13193.2|1.6e+04,AMP-binding_C|PF13193.2|3.5e+03,AMP-binding_C|PF13193.2|8.9e-14 R_Transcript_166702:488-2206(+)
ATGGCTGCCAAAGTAGAAACAATTCCACAACAAATGATGACTCATTTCCATGATCATCTTCATGAAAAGAAAGAGGAGGTGAAGGAAGTTGGTGAGGAGGAGTACATCTTCCGTTCGAAGCTCCCGGATATATACATCCCCAACCACCTCCCCCTCCACCAGTACTGCTTCCAGAACATTGCTGACCACCACAACCGTCTCTGTGTGGTCGACGGGGCCACCGGCCGCGAATGGACCTACACAGAGGCGGAGCTGACAGCCAGGAAAGTAGGCGCAGGGCTCCGCTCCCAGCTGGGTCTAAAGAAGGGGGACGTGATGATGCTGCTCCTCCAGAACAGCCCCGAGTTCATCTTCTCCTTCCTCGGGGCGTCCTTCATCGGAGCCATCAGCACCACGGCCAACCCATTCTGCACCACGACCGAGATCGAGAAACAGGCTCGAGCGTCCGGTGCCCGAGCCATCATCACCCAGTCCGCATTTGCGGACAAGGTGAGGCCGTATTGTGATGACAAAAAGATCCCCCTAGTGATAGTAGACACCCCGCCTCCCAACGGGTCCCACCACTACTTCTGGGACCTGGCGGGGGACGTGGTGGAAGGAGTACCTAAAGAACAAGTAGAAATATTCCCTGACGACGTGGTGGCCTTACCTTACTCATCAGGCACCACGGGGCTCCCTAAGGGCGTGATGCTCACGCACAAAAGCCTCGTGACAAGTGTCGCTCAACAAGTGGATGGAGAAAATCCGAACCTGTTTTTCCACAGCCAGGACGTGATACTCTGCGTTTTGCCCCTTTTCCACATCTATTCGCTAAACTCCGTGTTGCTGTGTGCTCTACGCGTTGGGGCTGCGATTCTTGTAATGCCAAAGTTCGAGATTTACATGTTGATGGAATTAGTGCAAAAATACAAAGTGACAATTGCCCCCTTTGTGCCCCCAATAGTTTTAGCCATTGCTAAGAACCCCGACTTAGACAAATATGACTTGTCTTCTATAAGGACGGTTATGTCAGGAGCTGCTCCTATGGGCAAAGAATTGGAAGACACCGTGAGGGCTAAGCTCCCTAATGCTAAACTTGGACAGGGTTATGGAATGACAGAGGCAGGGCCAGTACTAGCAATGTGTTTGGCATTTGCAAAGGAGCCAATGGAGGTAAAATCAGGGTCATGTGGGACGGTCGTACGTAACGCAGAATTGAAGATTGTTGACCCGGAAACCGGCCATTCTTTGCCTCGTAACCAGCCCGGTGAGATCTGCATCCGAGGGAGCCAAATCATGAAAGGTTATTTGAAGGACCCTGAGGCCACAGCAAACACCATAGACAAAGACGGATGGTTGCACACTGGTGACATTGGATATGTTGACGACGATGACGAGATCTTCATCGTCGATCGGCTCAAGGAGTTGATCAAGTACAAGGGATTCCAAGTAGCCCCGGCCGAGCTCGAAGGGATGCTCATCAACCACCCCTGTATCATTGATGCCGCCGTTGTTGCGATGAAAGATGAGGCTGCGGGTGAAGTTCCTGTTGCATTTGTTGTCAAATCGAATGGGTCACAAATTAGCGAGGATGAGGTGAAACAATACATCTCAAAACAGGTAGTATTCTATAAGAGAATATACAAGGTTTTCTTTGTGGACGCGATTCCTAAGCTTCCATCAGGGAAAATACTAAGGAAAGAGCTAAGAGCAAGATTAGTAAATGGCATAACCAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_166702.p1 GENE.R_Transcript_166702~~R_Transcript_166702.p1 ORF type:complete len:573 (+),score=51.39,AMP-binding|PF00501.24|6.4e-110,AMP-binding_C|PF13193.2|1.6e+04,AMP-binding_C|PF13193.2|3.5e+03,AMP-binding_C|PF13193.2|8.9e-14 R_Transcript_166702:488-2206(+)
MAAKVETIPQQMMTHFHDHLHEKKEEVKEVGEEEYIFRSKLPDIYIPNHLPLHQYCFQNIADHHNRLCVVDGATGREWTYTEAELTARKVGAGLRSQLGLKKGDVMMLLLQNSPEFIFSFLGASFIGAISTTANPFCTTTEIEKQARASGARAIITQSAFADKVRPYCDDKKIPLVIVDTPPPNGSHHYFWDLAGDVVEGVPKEQVEIFPDDVVALPYSSGTTGLPKGVMLTHKSLVTSVAQQVDGENPNLFFHSQDVILCVLPLFHIYSLNSVLLCALRVGAAILVMPKFEIYMLMELVQKYKVTIAPFVPPIVLAIAKNPDLDKYDLSSIRTVMSGAAPMGKELEDTVRAKLPNAKLGQGYGMTEAGPVLAMCLAFAKEPMEVKSGSCGTVVRNAELKIVDPETGHSLPRNQPGEICIRGSQIMKGYLKDPEATANTIDKDGWLHTGDIGYVDDDDEIFIVDRLKELIKYKGFQVAPAELEGMLINHPCIIDAAVVAMKDEAAGEVPVAFVVKSNGSQISEDEVKQYISKQVVFYKRIYKVFFVDAIPKLPSGKILRKELRARLVNGITK*

Click here to download the sequence:
Link to NCBI Protein BLAST