Transcript Information: R_Transcript_166956.p1


Annotated TAIR IDAT1G80190.1
Annotated Gene Namepartner of SLD five 1
Annotated Gene Symbol(s)PSF1
Annotation TypeHomolog
Chromosome Positionchr1:30159476-30161115 | Forward length=201
E-Value8E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.52151317013482
Replicate 20.39992953173901
Replicate 31.9634346510988
Condition 2: 8 Hour
Replicate 10.93279485513315
Replicate 20.21296077943986
Replicate 31.5558523388903
Condition 3: 24 Hour
Replicate 10.87458313248397
Replicate 21.260300508033
Replicate 31.042271651757


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_166956.p1 GENE.R_Transcript_166956~~R_Transcript_166956.p1 ORF type:3prime_partial len:105 (+),score=14.65,Sld5|PF05916.7|3.3e-06 R_Transcript_166956:145-456(+)
ATGGAGGATACAGAGATTTATGGAAGAAAGGCTTGTCAGCTAGTCAAGGAGCTTGCGTCAACAGACCCCGGCCAATTAACTCGCTTCAATGATGACTGTTTGAAAGAATGTACTGTGCACTACAGTCAGTTTTATGATCTTACCAGGAAAACGCAGGAGGAAGGATTGGATGTCCAGTCATCAAGAAATGCTGATCACTTTGGAATGCTTATTCACCATCTTTCTCTTTTGCGAAACAAGCGCTGTTTGATGGCTTATGTGTATAAAAGAGCAGAAATCATTCGAAGCCTAAGCTGGAAGGTGGGACGGTGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_166956.p1 GENE.R_Transcript_166956~~R_Transcript_166956.p1 ORF type:3prime_partial len:105 (+),score=14.65,Sld5|PF05916.7|3.3e-06 R_Transcript_166956:145-456(+)
MEDTEIYGRKACQLVKELASTDPGQLTRFNDDCLKECTVHYSQFYDLTRKTQEEGLDVQSSRNADHFGMLIHHLSLLRNKRCLMAYVYKRAEIIRSLSWKVGRC

Click here to download the sequence:
Link to NCBI Protein BLAST