Transcript Information: R_Transcript_16699.p1


Annotated TAIR IDAT2G41500.1
Annotated Gene NameWD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related
Annotated Gene Symbol(s)LIS, EMB2776
Annotation TypeOrtholog
Chromosome Positionchr2:17304319-17306855 | Reverse length=554
E-Value1.6E-257
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.439724215015
Replicate 26.2711722365511
Replicate 38.542776727278
Condition 2: 8 Hour
Replicate 18.4043892888234
Replicate 29.9627691371619
Replicate 315.186248489334
Condition 3: 24 Hour
Replicate 115.608278181211
Replicate 212.228658394776
Replicate 315.711471186139


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_16699.p1 GENE.R_Transcript_16699~~R_Transcript_16699.p1 ORF type:complete len:606 (+),score=161.17,WD40|PF00400.28|2.1e+02,WD40|PF00400.28|0.015,WD40|PF00400.28|0.019,WD40|PF00400.28|0.0098,WD40|PF00400.28|1.5e-06,WD40|PF00400.28|0.63,WD40|PF00400.28|2.6e-05,PRP4|PF08799.7|1.4e-12 R_Transcript_16699:229-2046(+)
ATGGAGGTAGATGAAGAAAACCATGCTTCTTCATTGGTTGCAGAACCGTCTTCTGTGGTGTCTGATACTGAGATGCTCACTACACCAGCTGCTGCTGCAGTCACCAATCCCGAGGCTCCATCACTGGCTGCTGCTCCCGTGCCTCCAGTTGTGCCTGTCGTAATTCCTGCTCCTGTAGTCATGCCCTCGGCTGTGCCCCAGTCAGTTACTCCAGCAGTTGTGCCATTAGCAGCATCTGTACCCCCTCCTGGAGTTCCTCCGATCGCTGCTATACCCGTTATACCTCCTACAGTTCCTAGACCATTGGCACCCCTACCTGTTCGCCCCCCTGTGCTTAAACCACCTGTTGTACAAAATGGGGAGGTGAAAGCGAGTGATTCAGAGTCTGACCATGATGATGCTGCACAGGCTTCATCTGTGGATTATGAGATTACAGAGGAAAGTAGACAGGTTAGGGAGCGGCAGGAAAAAGCAATGCGGGAGTTGATGATGAAGCGACGAGCTGCTGCTCTTGCCGTACCCACTAACGACATGGCTGTGCGGGCTCGTCTGCGTCGGCTTGGTGAGCCTATAACTCTTTTTGGAGAGAGAGAGATGGAAAGACGGGATAGGCTCCGGATGCTTATGGCAAAGCTTGATGATGAGGGGCAGTTGGAGAAATTGATGAAAGCCCATGAGGAAGAAGAGGAGGCAGCTTCCGCTAAGGAGGATATCGAAGAAGAAACGATCCAATACCCATTTTACACTGAAGGCTCGAAAGAATTGTTAGAGGCACGGGCTTTTATAGCTAAGTACTCAATCCCCCGGGCTTCTCAACGTCTGCAGCGTGCGAGGAGGAAAAGGGAAGATCCAGATGAAGATGAGGATGCGGAACTTGATTGGGCTTTGAGACAGGCTGAAACTTTAGTTCTTGATTGCAGTGAAATTGGTGACGAACGCCCACTTTCGGGATGTTCATTCTCAAATGACGGGAAGTTGCTTGCTACCTGTTCCTTGAGTGGAGTCGGCAAGGTGTGGAGTATGCCTCAGGTGAATAAGGTCGCTGCCTTGAAGGGACATACTGAGCATGCTACTGACATTGCATTTTCTCCTGTTAGTGATAATATAGCAACTGCCTCGTTTGACCGCACTGCAAGGTTGTGGAACACGCAGGGCACTGTAGTGAAAACTTTTGAAGGTCATCTTGGCCGTCTTGCTCGTATTGCTTTCCATCCCTCTGGGAAGTACTTGGGCACTACCAGCTTTGACAAGACTTGGCGCCTATGGGATATTGAAAGTGGTTCAGAGCTGCTTCTTCAAGAAGGCCATAGCAGGAGTGTATATGGGCTATCTTTTCATCCAGATGGCTCATTGGCAGCTTCTTGTGGGCTGGATGCCCTTGCACGTGTCTGGGACCTTCGAACAGGAAGAAGTGTCCTTGCTTTGGAAGGTCATGTTAAACCTGTTTTTGGGATCAGCTTTTCTCCTAATGGCTATCATTTGGCCACCGGTTCTGAGGATAACACTTGTCGAATTTGGGACTTAAGAAAGAAACAGTCCTTGTACATCATACCAGCCCATTCAAACCTTATTTCACAGGTCAAGTTTGAGCCTCAAGAGGGATATTATCTAGTAACTGCCTCATATGACATGACTGCAAAGGTATGGTCATCTCGAGATTTCAGACTTGTCAAGACTCTCTCAGGCCATGAAGCAAGAGTTACATCAATAGATGTAACCAGAGATGGACAGTATATTGCAACTGTTGCACATGACCGCTCTATCAAGTTGTGGTCGAGCAGTACCCCCCCTGAAGATGGGTCAATGGACATAGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_16699.p1 GENE.R_Transcript_16699~~R_Transcript_16699.p1 ORF type:complete len:606 (+),score=161.17,WD40|PF00400.28|2.1e+02,WD40|PF00400.28|0.015,WD40|PF00400.28|0.019,WD40|PF00400.28|0.0098,WD40|PF00400.28|1.5e-06,WD40|PF00400.28|0.63,WD40|PF00400.28|2.6e-05,PRP4|PF08799.7|1.4e-12 R_Transcript_16699:229-2046(+)
MEVDEENHASSLVAEPSSVVSDTEMLTTPAAAAVTNPEAPSLAAAPVPPVVPVVIPAPVVMPSAVPQSVTPAVVPLAASVPPPGVPPIAAIPVIPPTVPRPLAPLPVRPPVLKPPVVQNGEVKASDSESDHDDAAQASSVDYEITEESRQVRERQEKAMRELMMKRRAAALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRMLMAKLDDEGQLEKLMKAHEEEEEAASAKEDIEEETIQYPFYTEGSKELLEARAFIAKYSIPRASQRLQRARRKREDPDEDEDAELDWALRQAETLVLDCSEIGDERPLSGCSFSNDGKLLATCSLSGVGKVWSMPQVNKVAALKGHTEHATDIAFSPVSDNIATASFDRTARLWNTQGTVVKTFEGHLGRLARIAFHPSGKYLGTTSFDKTWRLWDIESGSELLLQEGHSRSVYGLSFHPDGSLAASCGLDALARVWDLRTGRSVLALEGHVKPVFGISFSPNGYHLATGSEDNTCRIWDLRKKQSLYIIPAHSNLISQVKFEPQEGYYLVTASYDMTAKVWSSRDFRLVKTLSGHEARVTSIDVTRDGQYIATVAHDRSIKLWSSSTPPEDGSMDID*

Click here to download the sequence:
Link to NCBI Protein BLAST