Transcript Information: R_Transcript_167026.p1


Annotated TAIR IDAT5G52630.1
Annotated Gene Namemitochondrial RNAediting factor 1
Annotated Gene Symbol(s)MEF1
Annotation TypeOrtholog
Chromosome Positionchr5:21350375-21352141 | Forward length=588
E-Value6.6e-309
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8667800976417
Replicate 20.98846219492312
Replicate 31.4130779685938
Condition 2: 8 Hour
Replicate 11.311742765031
Replicate 21.5609057129399
Replicate 32.1510837261173
Condition 3: 24 Hour
Replicate 12.4970342276886
Replicate 21.6827876101577
Replicate 33.7308587534484


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_167026.p1 GENE.R_Transcript_167026~~R_Transcript_167026.p1 ORF type:complete len:616 (+),score=125.93,PPR|PF01535.16|1.8e+03,PPR|PF01535.16|5.1e+03,PPR|PF01535.16|0.00017,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.0045,PPR|PF01535.16|5.1e+02,PPR|PF01535.16|4.1,PPR|PF01535.16|0.00042,PPR|PF01535.16|0.27,PPR|PF01535.16|0.0027,PPR|PF01535.16|4.1e+02,PPR|PF01535.16|19,PPR|PF01535.16|2e+03,DYW_deaminase|PF14432.2|3.1e-38,PPR_2|PF13041.2|1.5e-06,PPR_2|PF13041.2|0.0085,PPR_2|PF13041.2|2e-05,PPR_2|PF13041.2|1.4e+02,PPR_2|PF13041.2|2e-07,PPR_2|PF13041.2|9.5,PPR_2|PF13041.2|0.46,PPR_2|PF13041.2|3.1e+02,PPR_3|PF13812.2|3.9e+03,PPR_3|PF13812.2|3.2,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|46,PPR_3|PF13812.2|3.2e+02,PPR_3|PF13812.2|12,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|0.66,PPR_3|PF13812.2|8.4e+02,PPR_3|PF13812.2|73,PPR_3|PF13812.2|2.4e+03,PPR_1|PF12854.3|5.5,PPR_1|PF12854.3|1.9e+03,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|0.22,PPR_1|PF12854.3|5.3e+02,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|3.2e+03,PPR_1|PF12854.3|3.7e+02,PPR_1|PF12854.3|9.3e+02,PPR_1|PF12854.3|0.00045,PPR_1|PF12854.3|95 R_Transcript_167026:99-1946(+)
ATGCTCCAACCCATACCAGAGCCCAAACAACCGCCAAAAACCCTCCTCAAACCCTGTTCTTCACCATCATTCCCACCCAAAACCCCAACAAATCCATTCAATCAATTAAGCCACGAGCAACACTACCGCCATGTCTGCAACCTTCTCAACTCATTCACCCGCTCTCGGGCCCTCCCAAAAGGCCTTCAACTCCATGCCCTCATCATCAAATCAGGCTTCCAAACAGTCCCTCTTGTTGCCCATCACTTGATCAACTTTTACTCCAAATCCCAACTTCCTTACCTTTCTCGTCAAATCTTTGACGAAACCCCCCTCAAACTATCCACAACTTGGAGCTCAGTGATCTCAGCTTTTGCCCAGAATGAGCTCCCTTCCCTTGCTCTTGAATTCTTTCGCTCTATGTTGGGTACCGGGTTTCGACCTGATGATCATACTTATCCTAGCGTCACCAAGTCTTGTGCCATTCTTTCAAGGGTTGATGTGGGCAGGTCGATTCATGGAGTTGTTTCGAGAACTGGGTATGTGGCAGATGTCTTTGTTGGGAGCTCATTGGTTGATATGTATGCTAAATGTGGGGCGATAACGGATGCACGTAAGGTGTTCGATGAAATGCCGGAGAGAAATGTGGTGTCTTGGAGTGGAATGATTTTCGGGTATGCTCAGTTGGGTGAAGATGAGGAGGCTCTGAGGTTATTTACTCAAGCTTTGGTCGAGGAAGTTGATGTTAATGATTTTACTTTCTCCAGTGTGATACATGTTTGTGGAAATTTGACTCTTTTAGAGTTGGGGAAGCAAATTCATGGACTGTGCTTGAAGAAGAGCTACGACTCTTCGAGTTTTGTTGGGAGCGGTTTGGTGTCTTTGTACTCCAAGTGTGGGATCATTGAAGGGGCTTATCGTGTGTTCGGTGAAGTGCAAGTTAAGAATGTTGGGATATGGAATTCAATGCTGATTGCTTGCGCTCAACACGCGCATACAACAAAGGCATTGGATTTGTTTCATAAGATGGAAGGTTCGGGGACAAAACCCAACTTCATTACTTTCTTGTCTGTGCTTTATGCTTGCAGCCATGCTGGGTTGGTGAAGGAAGGGCAGTTTTACTTTGATTTGATGAACAAGTATGGGATTGAACCAGGGCACCAGCATTATGCTACCTTAGTGGATTTATTAGGTCGTGCTGGGAAGTTGCAGGAGGCTCTTTCAGTGATTAAGGAAATGCCCATCGAACCAACTGAGTCAGTTTGGGGGGCTCTACTTACTGGCTGCAGGCTACATGGGAATACCGAGTTGGCAGCATATGCTGCAGACAAGGTTTTCGAGTTGGGTAATGTGAGTTCTGGCCTTTTTGTGTTATTAAGTAATGCTTATGCTTCAGCTGGTAGACTTGAAGATGCAGCCAAAGCTAGGATGATGCTGAGGGATAGAGGGGTGAAGAAGGAAACAGGTTTAAGCTGGGTCGAGGAAGGAAGCAAAGTTCACACTTTTGCTGCAGGGGATAGATGTCACCAGAAATCAAAGGAGATATATGAGAAATTGGAGGAATTGGGCGATGAAATGGAGCAGGCTGGTTATGTTGCTGACACTAGTTTTGTGTTGCAGCAAGTGGATGATGAGGCTAAGAAACAAGCAATTAGGTACCACAGTGAGAGACTAGCAATTGCTTTCACTTTGATCAGCTTCCCACCTGAAAGACCCATTCGGATTATGAAAAACTTGCGTGTATGCGGTGATTGTCACACTGCAATCAAGTTTATGTCAAATTGCACTGGAAGAACTATTATTGTGAGAGATAACAGCAGATTCCATCGGTTTGAGGATGGTAAATGTTCATGTGGGGACTATTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_167026.p1 GENE.R_Transcript_167026~~R_Transcript_167026.p1 ORF type:complete len:616 (+),score=125.93,PPR|PF01535.16|1.8e+03,PPR|PF01535.16|5.1e+03,PPR|PF01535.16|0.00017,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.0045,PPR|PF01535.16|5.1e+02,PPR|PF01535.16|4.1,PPR|PF01535.16|0.00042,PPR|PF01535.16|0.27,PPR|PF01535.16|0.0027,PPR|PF01535.16|4.1e+02,PPR|PF01535.16|19,PPR|PF01535.16|2e+03,DYW_deaminase|PF14432.2|3.1e-38,PPR_2|PF13041.2|1.5e-06,PPR_2|PF13041.2|0.0085,PPR_2|PF13041.2|2e-05,PPR_2|PF13041.2|1.4e+02,PPR_2|PF13041.2|2e-07,PPR_2|PF13041.2|9.5,PPR_2|PF13041.2|0.46,PPR_2|PF13041.2|3.1e+02,PPR_3|PF13812.2|3.9e+03,PPR_3|PF13812.2|3.2,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|46,PPR_3|PF13812.2|3.2e+02,PPR_3|PF13812.2|12,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|0.66,PPR_3|PF13812.2|8.4e+02,PPR_3|PF13812.2|73,PPR_3|PF13812.2|2.4e+03,PPR_1|PF12854.3|5.5,PPR_1|PF12854.3|1.9e+03,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|0.22,PPR_1|PF12854.3|5.3e+02,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|3.2e+03,PPR_1|PF12854.3|3.7e+02,PPR_1|PF12854.3|9.3e+02,PPR_1|PF12854.3|0.00045,PPR_1|PF12854.3|95 R_Transcript_167026:99-1946(+)
MLQPIPEPKQPPKTLLKPCSSPSFPPKTPTNPFNQLSHEQHYRHVCNLLNSFTRSRALPKGLQLHALIIKSGFQTVPLVAHHLINFYSKSQLPYLSRQIFDETPLKLSTTWSSVISAFAQNELPSLALEFFRSMLGTGFRPDDHTYPSVTKSCAILSRVDVGRSIHGVVSRTGYVADVFVGSSLVDMYAKCGAITDARKVFDEMPERNVVSWSGMIFGYAQLGEDEEALRLFTQALVEEVDVNDFTFSSVIHVCGNLTLLELGKQIHGLCLKKSYDSSSFVGSGLVSLYSKCGIIEGAYRVFGEVQVKNVGIWNSMLIACAQHAHTTKALDLFHKMEGSGTKPNFITFLSVLYACSHAGLVKEGQFYFDLMNKYGIEPGHQHYATLVDLLGRAGKLQEALSVIKEMPIEPTESVWGALLTGCRLHGNTELAAYAADKVFELGNVSSGLFVLLSNAYASAGRLEDAAKARMMLRDRGVKKETGLSWVEEGSKVHTFAAGDRCHQKSKEIYEKLEELGDEMEQAGYVADTSFVLQQVDDEAKKQAIRYHSERLAIAFTLISFPPERPIRIMKNLRVCGDCHTAIKFMSNCTGRTIIVRDNSRFHRFEDGKCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST