Transcript Information: R_Transcript_167036.p2


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value4E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.32055420482898
Replicate 30
Condition 2: 8 Hour
Replicate 10.18691499959729
Replicate 20.17069375451287
Replicate 30
Condition 3: 24 Hour
Replicate 10.1752504368527
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_167036.p2 GENE.R_Transcript_167036~~R_Transcript_167036.p2 ORF type:3prime_partial len:131 (+),score=7.66,gag_pre-integrs|PF13976.2|4.8e-12,gag_pre-integrs|PF13976.2|1.8e+03 R_Transcript_167036:1281-1670(+)
ATGCAGGACCTTCGAGCAGGGACAACCTTGATGCGGTGCAATAGTACGGGCTCCCTTTATCCTCTCTCCCATGGCTCTAGTTCTCATGCGTCTGTGTCGTTGGCCACTGTCTCCCCAAATTACTGGCATGATCGTCTTGGGCATCCTGCAGCTCCTATTCTTTCTGCTCTAAATTCTTCTCACTTAATTCAATGTAATAAGGGGAATAGCCCCACTTTCTGCTCTTCATGTCAATTAGGAAAACATTCCCGTTTGCCATTTTATCCCTCTAAAAATGTAACTCATGCCCCCTTTGATATTATTCATAGTGATTTGTGGCATTCACCGATTAAAAGCTCGTCTGGTTATCTCTATTATGTCTTGTTCTTGGATGACTTTACCAATTTTTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_167036.p2 GENE.R_Transcript_167036~~R_Transcript_167036.p2 ORF type:3prime_partial len:131 (+),score=7.66,gag_pre-integrs|PF13976.2|4.8e-12,gag_pre-integrs|PF13976.2|1.8e+03 R_Transcript_167036:1281-1670(+)
MQDLRAGTTLMRCNSTGSLYPLSHGSSSHASVSLATVSPNYWHDRLGHPAAPILSALNSSHLIQCNKGNSPTFCSSCQLGKHSRLPFYPSKNVTHAPFDIIHSDLWHSPIKSSSGYLYYVLFLDDFTNFL

Click here to download the sequence:
Link to NCBI Protein BLAST