Transcript Information: R_Transcript_167144.p1


Annotated TAIR IDAT3G03550.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:850391-851461 | Reverse length=356
E-Value3.4E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.520545723392
Replicate 26.884733945059
Replicate 38.8174611113499
Condition 2: 8 Hour
Replicate 15.6352397943762
Replicate 25.5105228162596
Replicate 35.5822672172677
Condition 3: 24 Hour
Replicate 19.0241482585476
Replicate 27.2319688011873
Replicate 37.71196112186


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_167144.p1 GENE.R_Transcript_167144~~R_Transcript_167144.p1 ORF type:5prime_partial len:491 (+),score=73.45,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|1.8e-12,zf-RING_11|PF17123.1|2.9e+03,zf-RING_11|PF17123.1|7.8e-09,zf-rbx1|PF12678.3|2.6e-08 R_Transcript_167144:1-1473(+)
TCAACACAGAAGACCAAGACTACAAAAACACCAGGGTCTAAAAGAAAAATAGAAAGAAGAAACCAAATTAGATGTAGTCATATAAAACTCATCACTTATCAGCAATATCTTCCCTACTTTTTGTTATCTTCTTATAAGGCTCCCTTAGTTCTCCTCCCTTTAGTTCCCACAATTTTAATTTCTCTACGAGAATTCAATGGAACCAAAAAAATAAAATGGAGGTTTTGTCACCAATCTAGTCATAATTTGTTGTATTCCTTCCCAAATCTCAAGTTATTACTCCTAATATTTATGGGAACTCTAGGAGATCCAAAACCATGGATACCCTACATGAAAGCAAAGGAATGTTCTCAACGTTTATGCAGCTTATCAGCATGTCCACCATGGTGCTACAACATTTTTTCACCACCACCTCCTTTAACATTCCCTGATGACAAGTCTGAAAATGGCTCAGCTTTCTCCCCTCTTGTTATTGCCATCATCGGTATCCTTGCAAGTGCCTTCCTTCTTGTAAGCTACTATGCCTTAATCTCCAAGTATTGTGGCAATAATGGCAATGGATCCACAAGGCAGGAGCAAGTACATCATTTGCCTGATCTTAACGGAGACCATGTTTTGGATCAGGCAAATGATGACCTGAATCACCACGAGCCTTTCCAGCATGAGCCATGGTTTGTAAGAACCACTGGCTTAGACGAGGGGTTGATAAAGGCCATCACTCTTATCAAGTATAAGAAGGGGGAAAGCTTGGTTGGAAGCGCCGTTTGTTCCGTTTGTCTTGGTGAGTTCCTAGAAGATGACACTTTGAGGTTGTTGCCCAAATGTTGTCATGCGTTTCATGTTGCTTGTATTGATACTTGGCTTAAATCTCACTCCAATTGTCCTCTATGTAGAGCCAATATTGTGTCCTCTTGTGCTCAACCACCTCCTATAGTAGTAGTTATTGATCATAATAATAATAATAGTGGTAACCTTGTTCCTCAAGATCATGGTAACCAAGTAATTGAGAACGAGGAAATTAGACCAAGTGATCATCAAGGAGGAAGAGAAGTAACAAGTTTTGCACAACAAGCAAGTGAGAATTCACCAAAAATTCCTTTCCGAGTTTTTAGTGATCTTGGAGGCTTAGGATTGAGAGACAATAATCGTCATGGAGATGATGCAGGGCATATGATGATGATAAGGTCATTTTCAATGGATCATTCTCATGAAACACAGATTTCGATCTCGGGTATTTCAAGAATTGATCATATAGAAGTTTGTCAAATGGAAAATTGTCAGCTGCATGATCAATCTTTGAAGGAATCAACTGGTGAAAGTAGCAAGCCAGAGTTTGGTAGTAGTAATAGTAGTAGGAGTGGGGTATTGCAGTGTGTTATGAATCCTGTTGCTATGAAACGATTGTTTTCGAGTGGTAGATTTTTGTTCATGAGTATTCATGGCAGAGGAAACAATGCAGTTCTTCCCGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_167144.p1 GENE.R_Transcript_167144~~R_Transcript_167144.p1 ORF type:5prime_partial len:491 (+),score=73.45,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|1.8e-12,zf-RING_11|PF17123.1|2.9e+03,zf-RING_11|PF17123.1|7.8e-09,zf-rbx1|PF12678.3|2.6e-08 R_Transcript_167144:1-1473(+)
STQKTKTTKTPGSKRKIERRNQIRCSHIKLITYQQYLPYFLLSSYKAPLVLLPLVPTILISLREFNGTKKIKWRFCHQSSHNLLYSFPNLKLLLLIFMGTLGDPKPWIPYMKAKECSQRLCSLSACPPWCYNIFSPPPPLTFPDDKSENGSAFSPLVIAIIGILASAFLLVSYYALISKYCGNNGNGSTRQEQVHHLPDLNGDHVLDQANDDLNHHEPFQHEPWFVRTTGLDEGLIKAITLIKYKKGESLVGSAVCSVCLGEFLEDDTLRLLPKCCHAFHVACIDTWLKSHSNCPLCRANIVSSCAQPPPIVVVIDHNNNNSGNLVPQDHGNQVIENEEIRPSDHQGGREVTSFAQQASENSPKIPFRVFSDLGGLGLRDNNRHGDDAGHMMMIRSFSMDHSHETQISISGISRIDHIEVCQMENCQLHDQSLKESTGESSKPEFGSSNSSRSGVLQCVMNPVAMKRLFSSGRFLFMSIHGRGNNAVLPV*

Click here to download the sequence:
Link to NCBI Protein BLAST