Transcript Information: R_Transcript_167290.p1


Annotated TAIR IDAT2G17140.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:7462820-7465740 | Forward length=874
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.87966076890211
Replicate 20.45994086344574
Replicate 30.80286484455299
Condition 2: 8 Hour
Replicate 10.69729735884817
Replicate 20.46534146219335
Replicate 30.99406410845493
Condition 3: 24 Hour
Replicate 11.2321276606325
Replicate 21.0145902227867
Replicate 31.8459509976901


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_167290.p1 GENE.R_Transcript_167290~~R_Transcript_167290.p1 ORF type:complete len:913 (+),score=177.16,PPR_2|PF13041.2|2e+03,PPR_2|PF13041.2|2e-10,PPR_2|PF13041.2|4e-15,PPR_2|PF13041.2|0.0021,PPR_2|PF13041.2|5.8e-12,PPR_2|PF13041.2|2.3e-08,PPR_2|PF13041.2|4.1e-09,PPR_2|PF13041.2|3.1e-11,PPR_2|PF13041.2|1.5e-16,PPR_2|PF13041.2|6.3e-07,PPR_2|PF13041.2|6.8e-10,PPR_2|PF13041.2|0.00032,PPR_2|PF13041.2|1.7e-05,PPR_2|PF13041.2|1e-12,PPR_2|PF13041.2|1.8e-11,PPR_2|PF13041.2|1.7e-15,PPR_2|PF13041.2|1.1e+03,PPR_2|PF13041.2|0.0019,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|2.7e+03,PPR_1|PF12854.3|3.2e-12,PPR_1|PF12854.3|5.1e-10,PPR_1|PF12854.3|3.5e-10,PPR_1|PF12854.3|1.3e-09,PPR_1|PF12854.3|6.9e-07,PPR_1|PF12854.3|9.5,PPR_1|PF12854.3|7.1e-09,PPR_1|PF12854.3|6.7e-08,PPR_1|PF12854.3|0.0018,PPR_1|PF12854.3|2.4e-09,PPR_1|PF12854.3|4.9e-08,PPR_1|PF12854.3|6.5e-06,PPR_1|PF12854.3|0.21,PPR_1|PF12854.3|3.5e-09,PPR_1|PF12854.3|0.00019,PPR_1|PF12854.3|0.039,PPR|PF01535.16|45,PPR|PF01535.16|3.9,PPR|PF01535.16|1.8e-06,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|2.5e-07,PPR|PF01535.16|2.8e-05,PPR|PF01535.16|1.9e-07,PPR|PF01535.16|0.0034,PPR|PF01535.16|3.7e-07,PPR|PF01535.16|1.7e-05,PPR|PF01535.16|0.063,PPR|PF01535.16|9.2e-05,PPR|PF01535.16|0.0095,PPR|PF01535.16|5e-06,PPR|PF01535.16|2.6e-05,PPR|PF01535.16|5.5e-07,PPR|PF01535.16|1.8,PPR|PF01535.16|8.4e+02,PPR|PF01535.16|0.25,PPR_3|PF13812.2|3.9e+03,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|6.4e-05,PPR_3|PF13812.2|0.31,PPR_3|PF13812.2|0.0061,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|0.017,PPR_3|PF13812.2|66,PPR_3|PF13812.2|0.00054,PPR_3|PF13812.2|0.4,PPR_3|PF13812.2|8.2,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|0.00045,PPR_3|PF13812.2|92,PPR_3|PF13812.2|3.2e-06,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|5.6e+02,PPR_3|PF13812.2|1.8e+03,MRP-S27|PF10037.5|1.8e+03,MRP-S27|PF10037.5|2.3,MRP-S27|PF10037.5|1.2,MRP-S27|PF10037.5|5.2e+02,MRP-S27|PF10037.5|0.36,MRP-S27|PF10037.5|5.5,MRP-S27|PF10037.5|0.0045,MRP-S27|PF10037.5|9,TPR_19|PF14559.2|2.9e+02,TPR_19|PF14559.2|54,TPR_19|PF14559.2|2e+02,TPR_19|PF14559.2|61,TPR_19|PF14559.2|7.3e+03,TPR_19|PF14559.2|1.6,TPR_19|PF14559.2|2.2e+03,ECSIT|PF06239.7|4.9e+03,ECSIT|PF06239.7|16,ECSIT|PF06239.7|1.3e+03,ECSIT|PF06239.7|99,ECSIT|PF06239.7|1.2e+03,ECSIT|PF06239.7|1.3,ATP13|PF12921.3|64,ATP13|PF12921.3|3.9e+03,ATP13|PF12921.3|2.1e+03,ATP13|PF12921.3|2e+02,ATP13|PF12921.3|3.6,ATP13|PF12921.3|10,ATP13|PF12921.3|7.4e+02 R_Transcript_167290:106-2739(+)
ATGAATCAACCAACAACAAAACTCAACACAACCCTTCTCAAGAACTCCAAGACTCCAGCTTTAGCATGGCAAATCTTCAAAAGAACCCTCTTAAACCCATCTTCACCTCCTTTCTCTTCCCTTCAAAAACCCTTAACCATCATCACCCATATCTTAATTCGCGCCAAAATGTATTCCCAACTTGATGATCTTCACACCCATTTTCTCCATCAAAGCAACTCTGTATCATCCCCCGATACCCTCTTTACCCTTGTTCGCATCTTGGCTAAATCAGGCCTTGTAGATAAGGCCCTTGTACAGTTCCAATCTACTAGAAAACATTTTCCTCAAACCCCACCTTCCCTTTTCCTGTACAATTCCCTTCTTGAGTCTTCTATTCAAACAGGTCGGGCTGATTCTGTTCAATTCTTGTATAAAGACATGATCTTTAGTGGGGTTTCCCCGGATGTTTATACTTTCAATCTTTTGATACGTGGGTTGTGTGATTCAGGTCATGTTAAGGATGCACACCAGGTGCTCGACAAAATGCCTGAGAGAGGATGTAGGCCAAATGAGTTTAGTTTCGGTATTTTGATTCGTGGGTATTGTAGAGCGGGGCTGGAGATGGAGGCGTTGGGGATTTTGGATGAAATGAGAAACTTTGGGTTGGTTCCCAATAAGGTTGTGTATAATACATTGATTTCGAGCTTTTGTAAGGAGGGTAAGGATACTGAGGCTGAGGTTTTGGTAGAGAAGATGAGAGAGGATGGTGTAGCTCCTGATGTTGTCACTTTCAATTCTAGGATTGCGGCTTTGTGTAAGGCCGGGAAGATGCTTGAAGCTTCTAGAATTTTTAGGGATATGCAGATAGATGAGGCACTGGGATTGCCTCGACCAAATATTGTTACATTCAATCTTATGCTTGACGGGTTTTGCAAGTTAGGCATGCTGGAGGAATCTGAAACTTTGATTGAGAACATGAAGAAAAGTGGCCTTTCAATGAGGCTAGAGAGTTATAATATATGGTTGATGGGGTTGGTGACGAAGGGGAAGCTTTTTGAAGCGCAGCTGGTTCTCAAAGAGATGGCAGGCAAGGGGATCAAGCCTGATATTTACTCATATAATATTGTGATGGATGGGTTGTGCAAGAATGGTATGTTTTCTGATGCGAAAATGCTGATGAGTTTAATGAAAAGTAGCGGTGTTGCACCTGATGCAGTAACTTATAGCTCTTTGCTTCATGGATTCTGCAGTAAAAGGTTGGTGTTAGAAGCAAATAACACTTTGAATGAGATGATGAGAAGTGGTTGTTTCCCTAGCGTTTATGCTTGCAATATTTTGCTACATAGCTTGTGGAATGAGGGGAAAATATCAGAGGCAGAGAGGTTGCTACAGAAAATAAATGAGAAGGGCTATGATCTGGATACTACAACGTGTAACATAGTGATTCATGGTCTCTGCAAAAGCGGAAAGCTGGATAAAGCTATTGAAGCTGTTGAGGGGATGTGGAATCATGGAAAGGCTGCTCTTGGTGATCTCGGGAAACTCTATGTTGGCCTGATAGATAACAGCAGCGATGCAAAGAAATGCATCCCTGATTTAATTACATATTCAATCATTATCAAAGAACTATGTGAGGCTGGCAGGATTGAAGACGCTAAAAAGAAGTTGATTGAGATGGTAGGGAAAAAAGTATATCCTGATTCAATTATATACAATACTTTCATACAGAGTTACAGTAAAATTGGGAAGGTATCATCTGCATTCCGGGTTCTGAAGGACATGGAGAAAAAGGGGCTTGACAAAAATTTGCAGACTTATAATTCTTTGATCATGGGCTTGGGGATTAACAATCAAATTTTTGAGATGTATGGATTTCTTAATGAGATGAGAGAACGAGGCATCACTCCAAGTGTACATACCTACAATACTATAATCGGTTGCCTTTGTGATACTGGTCAAACCAATGATGCTATGTCTCTTTTGAATGAGATGTTACAGAAAGGTGTAGTTCCTAATATTCACTCTTTCAGACTGCTAATCAAGGCCTTCTGTGAAGAAGGTGAATTCACAGCCGCACAAGAAGTTTTCGAAATTGCTATCAATGCTTGTGGCCATAAGGAAGCACTCTACAGTGCCATGTTTAATGAGCTTCTTCTAGGAGGGGAAATTTCTGAAGCTGGTGAATTGTTTGCAGCTGCTGTAGACCAGCATCTTTACATTGGAAAGTTAAATTACAAAGACCTGATTGACAGATTCTGCAAGGATGAAAATTTGGAAGATGCTATCCGAATTCTCCATAAACTGATCAGTCAAGGATACAGTTTTGACCCTGCTACATTCATGCCAGTGATTGATACTTTGCGTAAAGTGGGAAAGAAACAAGAAGCAGATGATTTTTCTGAGAGGATGTTGTTTATGTCATCAGACGGCAAAGTCACAGATAAAGTGTGTTGTGACAACATTGGAGGTGATCTTGTAAATTCAAAGAAACAAGGTGAAAGTGAATGGGAAAATATACTACACAGAGAGGATGGCAGTGGAATAGCACTCAGATCTCTTAAGCGGGTACAAAGTGGATGGGGACAGGGAAGCATATTAAACCTGCAATTCCCAAAAAAAGACCCACATGATTTTTGGGAGGATGAAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_167290.p1 GENE.R_Transcript_167290~~R_Transcript_167290.p1 ORF type:complete len:913 (+),score=177.16,PPR_2|PF13041.2|2e+03,PPR_2|PF13041.2|2e-10,PPR_2|PF13041.2|4e-15,PPR_2|PF13041.2|0.0021,PPR_2|PF13041.2|5.8e-12,PPR_2|PF13041.2|2.3e-08,PPR_2|PF13041.2|4.1e-09,PPR_2|PF13041.2|3.1e-11,PPR_2|PF13041.2|1.5e-16,PPR_2|PF13041.2|6.3e-07,PPR_2|PF13041.2|6.8e-10,PPR_2|PF13041.2|0.00032,PPR_2|PF13041.2|1.7e-05,PPR_2|PF13041.2|1e-12,PPR_2|PF13041.2|1.8e-11,PPR_2|PF13041.2|1.7e-15,PPR_2|PF13041.2|1.1e+03,PPR_2|PF13041.2|0.0019,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|2.7e+03,PPR_1|PF12854.3|3.2e-12,PPR_1|PF12854.3|5.1e-10,PPR_1|PF12854.3|3.5e-10,PPR_1|PF12854.3|1.3e-09,PPR_1|PF12854.3|6.9e-07,PPR_1|PF12854.3|9.5,PPR_1|PF12854.3|7.1e-09,PPR_1|PF12854.3|6.7e-08,PPR_1|PF12854.3|0.0018,PPR_1|PF12854.3|2.4e-09,PPR_1|PF12854.3|4.9e-08,PPR_1|PF12854.3|6.5e-06,PPR_1|PF12854.3|0.21,PPR_1|PF12854.3|3.5e-09,PPR_1|PF12854.3|0.00019,PPR_1|PF12854.3|0.039,PPR|PF01535.16|45,PPR|PF01535.16|3.9,PPR|PF01535.16|1.8e-06,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|2.5e-07,PPR|PF01535.16|2.8e-05,PPR|PF01535.16|1.9e-07,PPR|PF01535.16|0.0034,PPR|PF01535.16|3.7e-07,PPR|PF01535.16|1.7e-05,PPR|PF01535.16|0.063,PPR|PF01535.16|9.2e-05,PPR|PF01535.16|0.0095,PPR|PF01535.16|5e-06,PPR|PF01535.16|2.6e-05,PPR|PF01535.16|5.5e-07,PPR|PF01535.16|1.8,PPR|PF01535.16|8.4e+02,PPR|PF01535.16|0.25,PPR_3|PF13812.2|3.9e+03,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|6.4e-05,PPR_3|PF13812.2|0.31,PPR_3|PF13812.2|0.0061,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|0.017,PPR_3|PF13812.2|66,PPR_3|PF13812.2|0.00054,PPR_3|PF13812.2|0.4,PPR_3|PF13812.2|8.2,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|0.00045,PPR_3|PF13812.2|92,PPR_3|PF13812.2|3.2e-06,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|5.6e+02,PPR_3|PF13812.2|1.8e+03,MRP-S27|PF10037.5|1.8e+03,MRP-S27|PF10037.5|2.3,MRP-S27|PF10037.5|1.2,MRP-S27|PF10037.5|5.2e+02,MRP-S27|PF10037.5|0.36,MRP-S27|PF10037.5|5.5,MRP-S27|PF10037.5|0.0045,MRP-S27|PF10037.5|9,TPR_19|PF14559.2|2.9e+02,TPR_19|PF14559.2|54,TPR_19|PF14559.2|2e+02,TPR_19|PF14559.2|61,TPR_19|PF14559.2|7.3e+03,TPR_19|PF14559.2|1.6,TPR_19|PF14559.2|2.2e+03,ECSIT|PF06239.7|4.9e+03,ECSIT|PF06239.7|16,ECSIT|PF06239.7|1.3e+03,ECSIT|PF06239.7|99,ECSIT|PF06239.7|1.2e+03,ECSIT|PF06239.7|1.3,ATP13|PF12921.3|64,ATP13|PF12921.3|3.9e+03,ATP13|PF12921.3|2.1e+03,ATP13|PF12921.3|2e+02,ATP13|PF12921.3|3.6,ATP13|PF12921.3|10,ATP13|PF12921.3|7.4e+02 R_Transcript_167290:106-2739(+)
MNQPTTKLNTTLLKNSKTPALAWQIFKRTLLNPSSPPFSSLQKPLTIITHILIRAKMYSQLDDLHTHFLHQSNSVSSPDTLFTLVRILAKSGLVDKALVQFQSTRKHFPQTPPSLFLYNSLLESSIQTGRADSVQFLYKDMIFSGVSPDVYTFNLLIRGLCDSGHVKDAHQVLDKMPERGCRPNEFSFGILIRGYCRAGLEMEALGILDEMRNFGLVPNKVVYNTLISSFCKEGKDTEAEVLVEKMREDGVAPDVVTFNSRIAALCKAGKMLEASRIFRDMQIDEALGLPRPNIVTFNLMLDGFCKLGMLEESETLIENMKKSGLSMRLESYNIWLMGLVTKGKLFEAQLVLKEMAGKGIKPDIYSYNIVMDGLCKNGMFSDAKMLMSLMKSSGVAPDAVTYSSLLHGFCSKRLVLEANNTLNEMMRSGCFPSVYACNILLHSLWNEGKISEAERLLQKINEKGYDLDTTTCNIVIHGLCKSGKLDKAIEAVEGMWNHGKAALGDLGKLYVGLIDNSSDAKKCIPDLITYSIIIKELCEAGRIEDAKKKLIEMVGKKVYPDSIIYNTFIQSYSKIGKVSSAFRVLKDMEKKGLDKNLQTYNSLIMGLGINNQIFEMYGFLNEMRERGITPSVHTYNTIIGCLCDTGQTNDAMSLLNEMLQKGVVPNIHSFRLLIKAFCEEGEFTAAQEVFEIAINACGHKEALYSAMFNELLLGGEISEAGELFAAAVDQHLYIGKLNYKDLIDRFCKDENLEDAIRILHKLISQGYSFDPATFMPVIDTLRKVGKKQEADDFSERMLFMSSDGKVTDKVCCDNIGGDLVNSKKQGESEWENILHREDGSGIALRSLKRVQSGWGQGSILNLQFPKKDPHDFWEDEV*

Click here to download the sequence:
Link to NCBI Protein BLAST