Transcript Information: R_Transcript_167322.p1


Annotated TAIR IDAT1G58030.1
Annotated Gene Namecationic amino acid transporter 2
Annotated Gene Symbol(s)CAT2
Annotation TypeOrtholog
Chromosome Positionchr1:21464185-21468141 | Reverse length=635
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2477681887858
Replicate 21.495285489588
Replicate 31.4953953326865
Condition 2: 8 Hour
Replicate 11.3441795297449
Replicate 21.492937214916
Replicate 31.346558651364
Condition 3: 24 Hour
Replicate 11.6690393978598
Replicate 20.9162422091041
Replicate 32.1433063936724


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_167322.p1 GENE.R_Transcript_167322~~R_Transcript_167322.p1 ORF type:complete len:674 (+),score=117.60,AA_permease_2|PF13520.2|7.1e-56,AA_permease_2|PF13520.2|1.6e+04,AA_permease|PF00324.17|2.5e-36,AA_permease|PF00324.17|9.3e+02,AA_permease_C|PF13906.2|7.7e+02,AA_permease_C|PF13906.2|6.9e+02,AA_permease_C|PF13906.2|5e-22 R_Transcript_167322:318-2339(+)
ATGGGTTTTGGTGGAGCAAGTGATTCAGGAAAGGGGTTGGTTGGGGGTGATGGTGGTGGTGCTTTTATGGGAGGGTGTTTGAAGAGTTTTGTAAGAAGGAAAATGGTGGATTCACACCATAGTAATAACAGTTCTTCATCTTCCAGTGGTCACCAATTGGCTAAAGCATTATCTGTTCCTCACCTTGTTGCTATTGGTGTTGGCTCAACAATTGGGGCTGGAGTTTATATCCTTATTGGAACAGTAGCAAGAGAGCATTCTGGACCAGCACTTGCCATATCTTTTCTTATAGCTGGTATAGCAGCTGGTCTTTCAGCCTTCTGTTATGCAGAGCTTGCTAGTAGGTGCCCATCTGCAGGAAGTGCTTATCATTACTCCTACATATGTGTTGGAGAGAGTGTTGCTTGGCTAATTGGCTGGGCTTTGATACTGGAATATACTGTTGGTGGTTCTGCAGTTGCTCGCGGCATTTCACCAAATCTGGCATTGCTATTTGGAGGTGAAAATAGCCTCCCTTCATTTCTGGCCCGTCAGCATATTCCTGTTCTTGACATCACAGTTGATCCCTGTGCTGCAATACTTGTACTTGTTGTCACTGGGCTTTTGTGCAAGGGAATCAAGGAGAGTACATTTGCACAAGGCATTGTGACAACAGGAAATGTATGTGCCATGATTTTTGTTATAGTAGCTGGTGGGTATCTGGGTTTCAAGAATGGATGGCCTGGATATGAGCTACCGACAGGATATTTCCCATATGGAGCAGATGGGATGCTTGCTGGTTCTGCAACAGTATTCTTTGCATACATCGGTTTCGATTCAGTGGCAAGCACTGCCGAGGAGGTGAAAAATCCACAAAGAGATTTGCCGCTTGGAATAGCTGTTGCACTTTCTATATGTTGTGCATTATACATGCTTGTTTCGATTGTTGTTGTTGGTCTGGTACCGTATTTTGCAATGGATCCTGACACTCCCATATCATCTGCATTTGCTTACTATGGGATGCACTGGGCAGCATATATCATTACTGTTGGAGCCGTTACAGCTCTCTGCGCTACATTGATGGGTTCAATGCTTCCTCAGCCTCGGATTCTGATGGCGATGGCTCGAGATGGTTTGTTGCCATCCTTTTTCTCAGACGTCAACAAAAAATCTCAAATTCCTGTCAAGAGTACTGTGACTACTGGAATTGTTGCTGCTCTATTAGCCTTCTTTATGGATGTTTCACAATTGGCGGGGATGGTCAGTGTTGGTACACTATTGGCATTCACTATGGTGGCCATATCACTTCTTATTATAAGATACGTGCCACCAAATAAGATGCCACTTCCATCGTCACTACAGGACTCTATTGATGCAGTTTCATTGCGATATAGTGACTACACCGAAGATTTTGCCACTGCTAAGGATAACACTGAACCTTTACTTGACAAAGGATCTATAAAATTCGACTTCCCTGTACTTTTGAAGCAAGTTGCTGAAGGAAGTTATACACTAAGTGATAAAAAGAGAAGGAAAATTGCTGGCTGGACGATCATGCTCACTTGCATGGGGGTGCTTTTACTCACATCTGCAGCCTCATATGTACATCTCCCCAGGTTTGTGATATTATCTATCTACTATTCAATTTTGAGTTACAGATTTGGTGTGCGTTGCTACCGATATCATTCATTTTTCAGTATGTTCCGTTACACATTGTGTGGAGTGGGTGGTGCTCTTCTGCTATCTGGTCTAACAGTCCTCACTTGCATTGATCAAGATGATGCCAGGCACAGCTTTGGCCACACAGGAGGTTTTGTCTGCCCATTGGTTCCTTTGTTACCGATTGTCTGTATTCTGATCAATGTCTACTTGCTGATAAATTTAGGATATGCGACCTGGGCACGCGTCTCAGTATGGCTAGTGATAGGAGCGCTAGTTTACATTTTCTATGGGCGGAGACACAGCTCTCTGAGGGATGTAGTGTATGTGCCAACCGCCCACATTGAGGAGATATACACCAGCTCCCATGAATACTTAGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_167322.p1 GENE.R_Transcript_167322~~R_Transcript_167322.p1 ORF type:complete len:674 (+),score=117.60,AA_permease_2|PF13520.2|7.1e-56,AA_permease_2|PF13520.2|1.6e+04,AA_permease|PF00324.17|2.5e-36,AA_permease|PF00324.17|9.3e+02,AA_permease_C|PF13906.2|7.7e+02,AA_permease_C|PF13906.2|6.9e+02,AA_permease_C|PF13906.2|5e-22 R_Transcript_167322:318-2339(+)
MGFGGASDSGKGLVGGDGGGAFMGGCLKSFVRRKMVDSHHSNNSSSSSSGHQLAKALSVPHLVAIGVGSTIGAGVYILIGTVAREHSGPALAISFLIAGIAAGLSAFCYAELASRCPSAGSAYHYSYICVGESVAWLIGWALILEYTVGGSAVARGISPNLALLFGGENSLPSFLARQHIPVLDITVDPCAAILVLVVTGLLCKGIKESTFAQGIVTTGNVCAMIFVIVAGGYLGFKNGWPGYELPTGYFPYGADGMLAGSATVFFAYIGFDSVASTAEEVKNPQRDLPLGIAVALSICCALYMLVSIVVVGLVPYFAMDPDTPISSAFAYYGMHWAAYIITVGAVTALCATLMGSMLPQPRILMAMARDGLLPSFFSDVNKKSQIPVKSTVTTGIVAALLAFFMDVSQLAGMVSVGTLLAFTMVAISLLIIRYVPPNKMPLPSSLQDSIDAVSLRYSDYTEDFATAKDNTEPLLDKGSIKFDFPVLLKQVAEGSYTLSDKKRRKIAGWTIMLTCMGVLLLTSAASYVHLPRFVILSIYYSILSYRFGVRCYRYHSFFSMFRYTLCGVGGALLLSGLTVLTCIDQDDARHSFGHTGGFVCPLVPLLPIVCILINVYLLINLGYATWARVSVWLVIGALVYIFYGRRHSSLRDVVYVPTAHIEEIYTSSHEYLA*

Click here to download the sequence:
Link to NCBI Protein BLAST