Transcript Information: R_Transcript_1675.p2


Annotated TAIR IDAT5G53360.1
Annotated Gene NameTRAF-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21648485-21649269 | Forward length=233
E-Value9.4E-81
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.215594866593
Replicate 226.175387852318
Replicate 325.502834523716
Condition 2: 8 Hour
Replicate 123.343191249707
Replicate 221.913664204362
Replicate 323.597093806503
Condition 3: 24 Hour
Replicate 131.834826022416
Replicate 227.789626202127
Replicate 327.724425936737


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_1675.p2 GENE.R_Transcript_1675~~R_Transcript_1675.p2 ORF type:complete len:150 (+),score=19.08,Sina|PF03145.12|3.3e-35 R_Transcript_1675:1914-2363(+)
ATGGAAAACCTTATTAGCTTTGTCTGGAAGTGTCTTAAATCAATATTTCACGTTGAAATAACTCATTCTACTCTCTTCCTGCCTCAGGTCTTCCATTGTTTTGGTCAATACTTCTGCCTTCACTTTGAAGCATTCCAGCTTGGCATGGCCCCTGTATACATGGCATTTCTCCGTTTCATGGGTGACGAAAATGAGGCCAGAAACTACAGCTACAGCCTCGAAGTCGGTGGCAATGGGAGGAAACTCACATGGGAAGGTACCCCTCGAAGCATCCGAGATAGCCACAGGAAGGTTAGAGACAGCCATGACGGTCTTATCATCCAACGAAACATGGCTCTCTTCTTTTCCGGTGGCGATAGGAAGGAGTTAAAACTTAGGGTAACTGGCAGAATATGGAAAGAGCAGCAGAGCCCTGATGCTGCTCCTTGCATACCAAATATGTGTAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_1675.p2 GENE.R_Transcript_1675~~R_Transcript_1675.p2 ORF type:complete len:150 (+),score=19.08,Sina|PF03145.12|3.3e-35 R_Transcript_1675:1914-2363(+)
MENLISFVWKCLKSIFHVEITHSTLFLPQVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARNYSYSLEVGGNGRKLTWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQSPDAAPCIPNMCS*

Click here to download the sequence:
Link to NCBI Protein BLAST