Transcript Information: R_Transcript_167610.p1


Annotated TAIR IDAT1G11290.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)CRR22
Annotation TypeOrtholog
Chromosome Positionchr1:3791454-3793883 | Reverse length=809
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0957103318381
Replicate 20.90724754885239
Replicate 31.8099150693256
Condition 2: 8 Hour
Replicate 10.87665442403717
Replicate 20.99381697071936
Replicate 31.6807046870729
Condition 3: 24 Hour
Replicate 11.3604626505306
Replicate 21.1163773018687
Replicate 31.2159835937165


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_167610.p1 GENE.R_Transcript_167610~~R_Transcript_167610.p1 ORF type:complete len:810 (+),score=149.45,PPR_2|PF13041.2|1.7e+02,PPR_2|PF13041.2|6.2e-05,PPR_2|PF13041.2|0.42,PPR_2|PF13041.2|5.5e-06,PPR_2|PF13041.2|5.8,PPR_2|PF13041.2|1.6e-10,PPR_2|PF13041.2|8e-06,PPR_2|PF13041.2|1.4e-09,PPR_2|PF13041.2|0.00043,PPR_2|PF13041.2|6.1e-12,PPR_2|PF13041.2|0.51,PPR_2|PF13041.2|0.91,PPR|PF01535.16|85,PPR|PF01535.16|0.027,PPR|PF01535.16|4.7e+03,PPR|PF01535.16|0.071,PPR|PF01535.16|0.00013,PPR|PF01535.16|0.42,PPR|PF01535.16|1.3e-09,PPR|PF01535.16|7.5e+02,PPR|PF01535.16|2e-05,PPR|PF01535.16|2.7e-07,PPR|PF01535.16|0.022,PPR|PF01535.16|5.6e-07,PPR|PF01535.16|0.0036,PPR|PF01535.16|0.078,PPR|PF01535.16|4.4e+03,PPR|PF01535.16|3e+03,PPR_3|PF13812.2|3.6e+02,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|10,PPR_3|PF13812.2|30,PPR_3|PF13812.2|1.7e-07,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|7.3e-05,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|0.063,PPR_3|PF13812.2|0.034,PPR_3|PF13812.2|3.5e+02,PPR_3|PF13812.2|2.9e+03,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|2.3e+02,PPR_1|PF12854.3|0.023,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|4.2e-05,PPR_1|PF12854.3|2.8e-05,PPR_1|PF12854.3|0.00011,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|0.0021,PPR_1|PF12854.3|1.4,PPR_1|PF12854.3|3.8,DYW_deaminase|PF14432.2|4.3e-39 R_Transcript_167610:193-2622(+)
ATGAGTTCAACACAAGTCTTATCCCAAACCTCTCTACCCATTCCACCATCATCATACCTCTCAAGACCTCCTCTTTCACAAAGAATCTACATTCCCACCCATATCTACAAACACCCAACTGCCATTCTTCTTGAACTCTGCACTTCCATTAAAGAACTCCACCAAATCATCCCTTTAATCTACAAACATGGCTTTTACAAAGAACACCTCTTTCAAACCAAACTTGTCAGTTTGTTCTGCAAATTCAACAGCTTGGATGATGCAGCTCGTGTTTTTGACCCCATTGAGGATAAGATTGATGCCCTTTATCACACCATGCTTAAAGGGTATGCTTTTAATTCCACCATTGTTGATGCTTTTGCTTTCTTTTGTAGGATGAAACAAGATGGGGTTGACCCCATTGTGTATAACTTTACTTATTTGTTGAAGTTGTGTGGTGATGATTCAGACCTTAGGAGGGGTAAGGAGATTCACAGTCAACTTATTCTTAATGGGTTTTCGTCGAATTTGTTTGCTATGACTGGGGTCATGAACATGTATGCAAAATGTAGGGAGTTAGGCGATGCATATAAGATGTTTGTTAGAATGCCTGAGAGAGATGTGCCTTCTTGGAATGCTATCATTGCTGGGTATGCTCAAAATGGGTTTGCTAAGATTGCTTTGGAGTTGCTTGTTACGATGCAGGAAGAAGGAAGAAGGCCTGATTGGATCACTGTGATCGCAGCTCTCCCTGCTTCGGCTGATATGGGGTCTCTTTGTTTAGGCAAAGCTATTCATGGGTATGTTATGAGAATTGGGTTTGATATGCATGTGAATGTTTTGACTGCATTGGTTGATGTGTATGGAAAGTGTCGAGCAGTGGACATTGCTAGGTTGATTTTCGATAGAATGGAGTCTCGGACTGTTGTTACTTGGAATTCTATTATTGATTGTTATGTTCAAAGTGGGAATCATGAGGAAGCGTTGACGCTTTTTCAGAGAATGTTGGATGAAGGAATCGAACCGAGTGATGTATCTATCATGGAAGCTCTGCATGCTTGTGCTGCGTTGGGGGATATAAAGAAGGGTATGAGCATTCACAAATTGTCTGATCAACTGGGGCTTGGCTCCAATGTATCTGTTACAAATTCCTTAATTTCCATGTATTGCAAATGTAAGAGGGTTGATGAAGCTGTGAAATTGTTTAGTAACTTGAAAAGTAAAACTCGGGTGTCCTGGAATGCACTCATCCTTGGTTTTGCACAGAGTGGTCGCGTAAATGAGGCTTTGAATTACTTCTCTGAGATGCAATTGAATGGCATACAATTGGATTCGTTCACTTTGGTGAGTGTGATTCCTGCTTTGGCTGAATTATCCATTTTACGACAAGCAAAATGGATCCATGGACTAGCAATAAGGACTTGCCTCGACAAGAATGTATTTGTGATGACTGCCCTTGTTGACATGTATGCGAAATGTGGTGCAATTCGGACTGCAAGGAAGCTTTTTGACAACATGGATGAGAGGCATGTAACAACCTGGAATGCCATGATAGATGCATATGGGACGCATGGGCTTGGGAGTGCAGCCGTTGAACTTTTCTCTGAAATGCAGAAAGGTCCAATCCAACCAAACAATGTGACATTTTTGTGCATAATATCAGCTTGCAGTCACTCAGGTCTTGTTGAAGAAGGCCGCTATTATTTCGAAATGATGAAGGAAGTATATAATTTGGAACCTGCAATGGATCATTATGGAGCAATGGTAGACCTTCTTGGCCGAGCTGGCCTTCTTACCGAGGCTTGGGACTTCATTCATGACATGCCTGTAGAGCCTGGTATTAGTGTATATGGAGCCATGTTGGGTGCTTGCAAGATCCACAGGAACATTGAATTGGGAGAAGCAGCAGCATATAAACTGTTTGAACTAGGGCCACAAGATGGTGGTTACCATGTATTGCTGGCTAATCTTTATTCTGGATCTTCAATGTGGGACAAAGTGGCTGAAGTCCGGTCAACGATGGATACGAAGGGGCTTCGTAAGACCCCAGGATGTAGTCTAGTGGAGCTAAGAAATGAGCTTCACACTTTCTACTCTGGCAGCACAATCCATCCGCAATCACAAGAAATTTATGCTTACTTGGAATCACTAATCGAGAAGATTAAGTCTGTAGGATATGTACCAGACACCAACTCCATACATGATGTGGAAGCTGATGTTCAAGAGAAGTTGCTAACTAGCCACAGTGAGAAACTAGCCATTTCATTTGGACTTCTGAATACAAGCCCTGGTGAGCCCATACACATTCGGAAAAATCTCCGTGTGTGTGGTGACTGCCACAATGCTACCAAGTACATTTCACTTGTGACAGGCCGAGAAATTATTGTGCGGGATATGCAGCGATTCCACCATTTCAAGGATGGAACCTGCTCATGTGGTGATTACTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_167610.p1 GENE.R_Transcript_167610~~R_Transcript_167610.p1 ORF type:complete len:810 (+),score=149.45,PPR_2|PF13041.2|1.7e+02,PPR_2|PF13041.2|6.2e-05,PPR_2|PF13041.2|0.42,PPR_2|PF13041.2|5.5e-06,PPR_2|PF13041.2|5.8,PPR_2|PF13041.2|1.6e-10,PPR_2|PF13041.2|8e-06,PPR_2|PF13041.2|1.4e-09,PPR_2|PF13041.2|0.00043,PPR_2|PF13041.2|6.1e-12,PPR_2|PF13041.2|0.51,PPR_2|PF13041.2|0.91,PPR|PF01535.16|85,PPR|PF01535.16|0.027,PPR|PF01535.16|4.7e+03,PPR|PF01535.16|0.071,PPR|PF01535.16|0.00013,PPR|PF01535.16|0.42,PPR|PF01535.16|1.3e-09,PPR|PF01535.16|7.5e+02,PPR|PF01535.16|2e-05,PPR|PF01535.16|2.7e-07,PPR|PF01535.16|0.022,PPR|PF01535.16|5.6e-07,PPR|PF01535.16|0.0036,PPR|PF01535.16|0.078,PPR|PF01535.16|4.4e+03,PPR|PF01535.16|3e+03,PPR_3|PF13812.2|3.6e+02,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|10,PPR_3|PF13812.2|30,PPR_3|PF13812.2|1.7e-07,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|7.3e-05,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|0.063,PPR_3|PF13812.2|0.034,PPR_3|PF13812.2|3.5e+02,PPR_3|PF13812.2|2.9e+03,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|2.3e+02,PPR_1|PF12854.3|0.023,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|4.2e-05,PPR_1|PF12854.3|2.8e-05,PPR_1|PF12854.3|0.00011,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|0.0021,PPR_1|PF12854.3|1.4,PPR_1|PF12854.3|3.8,DYW_deaminase|PF14432.2|4.3e-39 R_Transcript_167610:193-2622(+)
MSSTQVLSQTSLPIPPSSYLSRPPLSQRIYIPTHIYKHPTAILLELCTSIKELHQIIPLIYKHGFYKEHLFQTKLVSLFCKFNSLDDAARVFDPIEDKIDALYHTMLKGYAFNSTIVDAFAFFCRMKQDGVDPIVYNFTYLLKLCGDDSDLRRGKEIHSQLILNGFSSNLFAMTGVMNMYAKCRELGDAYKMFVRMPERDVPSWNAIIAGYAQNGFAKIALELLVTMQEEGRRPDWITVIAALPASADMGSLCLGKAIHGYVMRIGFDMHVNVLTALVDVYGKCRAVDIARLIFDRMESRTVVTWNSIIDCYVQSGNHEEALTLFQRMLDEGIEPSDVSIMEALHACAALGDIKKGMSIHKLSDQLGLGSNVSVTNSLISMYCKCKRVDEAVKLFSNLKSKTRVSWNALILGFAQSGRVNEALNYFSEMQLNGIQLDSFTLVSVIPALAELSILRQAKWIHGLAIRTCLDKNVFVMTALVDMYAKCGAIRTARKLFDNMDERHVTTWNAMIDAYGTHGLGSAAVELFSEMQKGPIQPNNVTFLCIISACSHSGLVEEGRYYFEMMKEVYNLEPAMDHYGAMVDLLGRAGLLTEAWDFIHDMPVEPGISVYGAMLGACKIHRNIELGEAAAYKLFELGPQDGGYHVLLANLYSGSSMWDKVAEVRSTMDTKGLRKTPGCSLVELRNELHTFYSGSTIHPQSQEIYAYLESLIEKIKSVGYVPDTNSIHDVEADVQEKLLTSHSEKLAISFGLLNTSPGEPIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKDGTCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST