Transcript Information: R_Transcript_167613.p1


Annotated TAIR IDAT1G11290.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)CRR22
Annotation TypeOrtholog
Chromosome Positionchr1:3791454-3793883 | Reverse length=809
E-Value4E-278
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17664155762631
Replicate 20.10159500201435
Replicate 30.29557080769229
Condition 2: 8 Hour
Replicate 10.51341329728095
Replicate 20
Replicate 30.32204470455525
Condition 3: 24 Hour
Replicate 10.66651698403012
Replicate 20.17786499105304
Replicate 30.38833024444495


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_167613.p1 GENE.R_Transcript_167613~~R_Transcript_167613.p1 ORF type:complete len:620 (+),score=113.10,PPR|PF01535.16|0.051,PPR|PF01535.16|9.7e-05,PPR|PF01535.16|0.31,PPR|PF01535.16|3.3e-11,PPR|PF01535.16|5.5e+02,PPR|PF01535.16|1.4e-05,PPR|PF01535.16|2e-07,PPR|PF01535.16|0.016,PPR|PF01535.16|4.1e-07,PPR|PF01535.16|0.0026,PPR|PF01535.16|0.057,PPR|PF01535.16|3.3e+03,PPR|PF01535.16|3e+02,PPR_2|PF13041.2|0.31,PPR_2|PF13041.2|4e-06,PPR_2|PF13041.2|4.2,PPR_2|PF13041.2|1.5e-11,PPR_2|PF13041.2|5.9e-06,PPR_2|PF13041.2|9.7e-10,PPR_2|PF13041.2|0.00031,PPR_2|PF13041.2|4.3e-12,PPR_2|PF13041.2|0.014,PPR_2|PF13041.2|0.71,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|0.017,PPR_1|PF12854.3|85,PPR_1|PF12854.3|7.7e-06,PPR_1|PF12854.3|2.1e-05,PPR_1|PF12854.3|8.3e-05,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|0.0015,PPR_1|PF12854.3|1,PPR_1|PF12854.3|2.8,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|7.3,PPR_3|PF13812.2|22,PPR_3|PF13812.2|6.6e-08,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|5.2e-05,PPR_3|PF13812.2|0.089,PPR_3|PF13812.2|0.045,PPR_3|PF13812.2|0.025,PPR_3|PF13812.2|2.5e+02,PPR_3|PF13812.2|2e+03 R_Transcript_167613:380-2239(+)
ATGGCTTTTACAAAGAACACCTCTTTCAAACCAAACTTGTCAGTTTGTTCTGCAAATTCAACAGCTTGGATGATGCAGCTCGTGTTTTTGACCCCATTGAGGATAAGATTGATGCCCTTTATCACACCATGCTTAAAGGACCTTAGGAGGGGTAAGGAGATTCACAGTCAACTTATTCTTAATGGGTTTTCGTCGAATTTGTTTGCTATGACTGGGGTCATGAACATGTATGCAAAATGTAGGGAGTTAGGCGATGCATATAAGATGTTTGTTAGAATGCCTGAGAGAGATGTGCCTTCTTGGAATGCTATCATTGCTGGGTATGCTCAAAATGGGTTTGCTAAGATTGCTTTGGAGTTGCTTGTTACGATGCAGGAAGAAGGAAGAAGGCCTGATTGGATCACTGTGATCGCAGCTCTCCCTGCTTCGGCTGATATGGGGGCTCTTTGTTTAGGCAAGGCTATTCATGGGTATGTTATAAGAAATGGGTTTGATATGCATGTGAATGTTTTGACTGCATTGGTTGATGTGTATGGAAAGTGTCGAGCAGTGGACATTGCTAGGTTGATTTTCGATAGAATGGAGTCTCGGACTGTTGTTACTTGGAATTCTATGATTGATGGTTATGTTCAAAGTGGGAATCCTGAGGAAGCGTTGACGCTTTTTCAGAGAATGTTGGATGAAGGAATCGAACCGAGTGATGTATCTATCATGGAAGCTCTGCATGCTTGTGCTGCGTTGGGGGATATAAAGAAGGGTATGAGCATTCACAAATTGTCTGATCAACTGGGGCTTGGCTCCAATGTATCTGTTACAAATTCCTTAATTTCCATGTATTGCAAATGTAAGAGGGTTGATGAAGCTGTGAAATTGTTTAGTAACTTGAAAAGTAAAACTCGGGTGTCCTGGAATGCACTCATCCTTGGTTTTGCACAGAGTGGTCGCGTAAATGAGGCTTTGAATTACTTCTCTGAGATGCAATTGAATGGCATACAATTGGATTCGTTCACTTTGGTGAGTGTGATTCCTGCTTTGGCTGAATTATCCATTTTACGACAAGCAAAATGGATCCATGGACTAGCAATAAGGACTTGCCTCGACAAGAATGTATTTGTGATGACTGCCCTTGTTGACATGTATGCGAAATGTGGTGCAATTCGGACTGCAAGGAAGCTTTTTGACAACATGGATGAGAGGCATGTAACAACCTGGAATGCCATGATAGATGCATATGGGACGCATGGGCTTGGGAGTGCAGCCGTTGAACTTTTCTCTGAAATGCAGAAAGGTCCAATCCAACCAAACAATGTGACATTTTTGTGCATAATATCAGCTTGCAGTCACTCAGGTCTTGTTGAAGAAGGCCGCTATTATTTCGAAATGATGAAGGAAGTATATAATTTGGAACCTGCAATGGATCATTATGGAGCAATGGTAGACCTTCTTGGCCGAGCTGGCCTTCTTACCGAGGCTTGGGACTTCATTCATGACATGCCTGTAGAGCCTGGTATTAGTGTATATGGAGCCATGTTGGGTGCTTGCAAGATCCACAGGAACATTGAATTGGGAGAAGCAGCAGCATATAAACTGTTTGAACTAGGGCCACAAGATGGTGGTTACCATGTATTGCTGGCTAATCTTTATTCTGGATCTTCAATGTGGGACAAAGTGTCTGAAGTCCGGTCAAAGATGGATACAAATGGGCTTCGTAAGACTCCTGGATGTAGTCTAGTGGAGCTAAGAAATGAGCTTCACACTTTCTACTCTGGCAGCACAATCCATCCGCAATCACAAGAAATTTATGCTTACTTGGAATCGCTAATCTGTAGGCTATGTACCAGACACCAACTCCATACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_167613.p1 GENE.R_Transcript_167613~~R_Transcript_167613.p1 ORF type:complete len:620 (+),score=113.10,PPR|PF01535.16|0.051,PPR|PF01535.16|9.7e-05,PPR|PF01535.16|0.31,PPR|PF01535.16|3.3e-11,PPR|PF01535.16|5.5e+02,PPR|PF01535.16|1.4e-05,PPR|PF01535.16|2e-07,PPR|PF01535.16|0.016,PPR|PF01535.16|4.1e-07,PPR|PF01535.16|0.0026,PPR|PF01535.16|0.057,PPR|PF01535.16|3.3e+03,PPR|PF01535.16|3e+02,PPR_2|PF13041.2|0.31,PPR_2|PF13041.2|4e-06,PPR_2|PF13041.2|4.2,PPR_2|PF13041.2|1.5e-11,PPR_2|PF13041.2|5.9e-06,PPR_2|PF13041.2|9.7e-10,PPR_2|PF13041.2|0.00031,PPR_2|PF13041.2|4.3e-12,PPR_2|PF13041.2|0.014,PPR_2|PF13041.2|0.71,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|0.017,PPR_1|PF12854.3|85,PPR_1|PF12854.3|7.7e-06,PPR_1|PF12854.3|2.1e-05,PPR_1|PF12854.3|8.3e-05,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|0.0015,PPR_1|PF12854.3|1,PPR_1|PF12854.3|2.8,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|7.3,PPR_3|PF13812.2|22,PPR_3|PF13812.2|6.6e-08,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|5.2e-05,PPR_3|PF13812.2|0.089,PPR_3|PF13812.2|0.045,PPR_3|PF13812.2|0.025,PPR_3|PF13812.2|2.5e+02,PPR_3|PF13812.2|2e+03 R_Transcript_167613:380-2239(+)
MAFTKNTSFKPNLSVCSANSTAWMMQLVFLTPLRIRLMPFITPCLKDLRRGKEIHSQLILNGFSSNLFAMTGVMNMYAKCRELGDAYKMFVRMPERDVPSWNAIIAGYAQNGFAKIALELLVTMQEEGRRPDWITVIAALPASADMGALCLGKAIHGYVIRNGFDMHVNVLTALVDVYGKCRAVDIARLIFDRMESRTVVTWNSMIDGYVQSGNPEEALTLFQRMLDEGIEPSDVSIMEALHACAALGDIKKGMSIHKLSDQLGLGSNVSVTNSLISMYCKCKRVDEAVKLFSNLKSKTRVSWNALILGFAQSGRVNEALNYFSEMQLNGIQLDSFTLVSVIPALAELSILRQAKWIHGLAIRTCLDKNVFVMTALVDMYAKCGAIRTARKLFDNMDERHVTTWNAMIDAYGTHGLGSAAVELFSEMQKGPIQPNNVTFLCIISACSHSGLVEEGRYYFEMMKEVYNLEPAMDHYGAMVDLLGRAGLLTEAWDFIHDMPVEPGISVYGAMLGACKIHRNIELGEAAAYKLFELGPQDGGYHVLLANLYSGSSMWDKVSEVRSKMDTNGLRKTPGCSLVELRNELHTFYSGSTIHPQSQEIYAYLESLICRLCTRHQLHT*

Click here to download the sequence:
Link to NCBI Protein BLAST