Transcript Information: R_Transcript_167656.p2


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.584094750551
Replicate 20.16797040333038
Replicate 30
Condition 2: 8 Hour
Replicate 10.97943459788981
Replicate 20.53666116418845
Replicate 31.597341734594
Condition 3: 24 Hour
Replicate 10.73464983128653
Replicate 20.17644207112462
Replicate 30.87550818747589


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_167656.p2 GENE.R_Transcript_167656~~R_Transcript_167656.p2 ORF type:complete len:125 (+),score=17.73,zf-RVT|PF13966.2|1.6e-16 R_Transcript_167656:1112-1486(+)
ATGTCTCGAGTCACCCTTGGTCCCTGGAAAAATATAAAGGATTTCAAGAAAGTGGGGTATTCTTCTTCTCCTGCAAGTCCTTCCTTGGGAACTACTCATCCTGCTTTCCCATTAGCTGATTTTTTGTGGAAGGCAAAGGCTCCTAAGAAGGTTCGCGCATTTGTGTGGACTTCTGTGTTAATTAGAATTAACACAAATGATGTGCGACAGAGGCACCAACCTACCATGGCTTTGTCGCCAAGTGTTTGTATGATGTGCGGACATGCTGATGAGACAGCAGCTCACCTGTGTTTACACTGCACCATTGCTAGGGGTATTTGGAGCAGGTTGTTTGGGGTCCGTGGGTGTGCCCGTCAACTGTTGAGGAGTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_167656.p2 GENE.R_Transcript_167656~~R_Transcript_167656.p2 ORF type:complete len:125 (+),score=17.73,zf-RVT|PF13966.2|1.6e-16 R_Transcript_167656:1112-1486(+)
MSRVTLGPWKNIKDFKKVGYSSSPASPSLGTTHPAFPLADFLWKAKAPKKVRAFVWTSVLIRINTNDVRQRHQPTMALSPSVCMMCGHADETAAHLCLHCTIARGIWSRLFGVRGCARQLLRSS*

Click here to download the sequence:
Link to NCBI Protein BLAST