Transcript Information: R_Transcript_167686.p1


Annotated TAIR IDAT1G11910.1
Annotated Gene Nameaspartic proteinase A1
Annotated Gene Symbol(s)APA1, ATAPA1
Annotation TypeOrtholog
Chromosome Positionchr1:4017119-4019874 | Reverse length=506
E-Value2.4E-178
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2299997546489
Replicate 21.2350764950764
Replicate 34.1978410526886
Condition 2: 8 Hour
Replicate 11.938925957361
Replicate 20.9106241473786
Replicate 31.560545709445
Condition 3: 24 Hour
Replicate 11.194637027686
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_167686.p1 GENE.R_Transcript_167686~~R_Transcript_167686.p1 ORF type:complete len:442 (+),score=73.19,Asp|PF00026.19|6.4e-98,SapB_2|PF03489.13|1.1e-13,SapB_1|PF05184.11|2e+03,SapB_1|PF05184.11|2.9e+03,SapB_1|PF05184.11|4.9e-10,TAXi_N|PF14543.2|1.2e-05 R_Transcript_167686:186-1511(+)
ATGGGTCACATGAATCTACCACTGGCTCTATGCTTTTGCGCTTTAATGAGTTCACACCTGCTCCTGCCTACTGAAGGCTTGGTGAGAATCAGTCTAAAGAAGCGTCCTCTAGATCATGACACTGTGAATGCAATGAGAATCGTTAGGAAGTTAGGGATGGACCGAGAAGGTATGAAAGGCCTTCAGTCGAAAAGTTCAGATGGGGACATAGTATATCTGAAGAACTATTTGGATGCTCAATACTATGGAGAAATTGGCATTGGCACGCCTCCGCAGAACTTCACTGTGATATTTGACACTGGAAGTTCTAACTTATGGGTCCCGTCATCAAAATGCTTCTTCTCTATTTCCTGCTATTTTCATTCCCGGTACAATTCGAGAAAATCAAGCACATTCACAGCAATCGGAAAATCATGCGAAATAAAGTATGGAACTGGATCTATCTCTGGTTTCTTTAGCCAGGATAATGTGGAAGTTGGAGACCTCATTGTCAAAGATCAGGAATTTATTGAAGCAACTAAAGAAGGAAGTCTCGCTTTTCTAATTGGAAAATTTGACGGCATATTTGGGCTTGGATTTAAAGAGATTTCTGTTGGAGATGCAACTCCTGTATGGTATAACATGGTGGAGCAAGGCCTTGTAGATGACGAGGTTTTCTCATTCTGGCTCAATAGAGATCCAGAAGCTAAAGTCGGAGGGGAGATAGTTTTTGGAGGGGTAGATCCAAAACATTACAAGGGGAAGCATACTTATGTTCCAGTAACAAAGAAGGGGTATTGGCAGTTTGAAATGGGGGATATCCAAATTGGCAATTATTCGACAGGCTTTTGTCAAGGGGGTTGTGCTGCTATTGTAGACTCAGGGACATCATTGCTTGCTGGCCCAACGCATGTTGTGACTGAAATCAACCATGCTATTGGTGCCAAAGGTATTGTGAGCAATGAGTGCAAAGACATTGTTTCTCAGTACGGAGATATGATATGGGATCTTCTGGTTAATGGGGTACAACCTGACAAGGTATGCTCTCAGCTTCGATTGTGCATCTTTGATGGGGCTCAGTATGTCAGTGCTGGTATTGAATCAGTGGTAGAAAGAGAAAGTCAAAAGAATATGTCACTTGGTGGGGATGACTACTTGTGCAATGCCTGTGAGATGGCTGTGGTTTGGGTCCGGAACCAATTGAAACAGAAGAAGACCAAAGAGCAAGTAATCAACTATGTCAACAAGGTGATGATTTCTGATAAACTTGTTGCTCACAGATTTGTTTGCCTTGTTCATAGCCATAGACTACAAACTCTGATGACGATGCTCTGTGCAGCTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_167686.p1 GENE.R_Transcript_167686~~R_Transcript_167686.p1 ORF type:complete len:442 (+),score=73.19,Asp|PF00026.19|6.4e-98,SapB_2|PF03489.13|1.1e-13,SapB_1|PF05184.11|2e+03,SapB_1|PF05184.11|2.9e+03,SapB_1|PF05184.11|4.9e-10,TAXi_N|PF14543.2|1.2e-05 R_Transcript_167686:186-1511(+)
MGHMNLPLALCFCALMSSHLLLPTEGLVRISLKKRPLDHDTVNAMRIVRKLGMDREGMKGLQSKSSDGDIVYLKNYLDAQYYGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCFFSISCYFHSRYNSRKSSTFTAIGKSCEIKYGTGSISGFFSQDNVEVGDLIVKDQEFIEATKEGSLAFLIGKFDGIFGLGFKEISVGDATPVWYNMVEQGLVDDEVFSFWLNRDPEAKVGGEIVFGGVDPKHYKGKHTYVPVTKKGYWQFEMGDIQIGNYSTGFCQGGCAAIVDSGTSLLAGPTHVVTEINHAIGAKGIVSNECKDIVSQYGDMIWDLLVNGVQPDKVCSQLRLCIFDGAQYVSAGIESVVERESQKNMSLGGDDYLCNACEMAVVWVRNQLKQKKTKEQVINYVNKVMISDKLVAHRFVCLVHSHRLQTLMTMLCAAL*

Click here to download the sequence:
Link to NCBI Protein BLAST