Transcript Information: R_Transcript_16780.p1


Annotated TAIR IDAT5G55760.1
Annotated Gene Namesirtuin 1
Annotated Gene Symbol(s)SRT1
Annotation TypeOrtholog
Chromosome Positionchr5:22567282-22570716 | Forward length=473
E-Value2.6E-175
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.0592091224894
Replicate 24.9008563625266
Replicate 37.4292121933467
Condition 2: 8 Hour
Replicate 16.6779631674305
Replicate 27.3620593776876
Replicate 36.7343813358192
Condition 3: 24 Hour
Replicate 18.6303304811762
Replicate 26.5569688593608
Replicate 38.3893904942407


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_16780.p1 GENE.R_Transcript_16780~~R_Transcript_16780.p1 ORF type:5prime_partial len:407 (+),score=86.54,SIR2|PF02146.13|5.2e-06,SIR2|PF02146.13|1.7e-20 R_Transcript_16780:2-1222(+)
AAAAAAAATAAAAAAGAGACCCCATTTCTGTGTACACCCCCCCGGCAAAGTGGAACAGAACAGGAGAAAGTGATCTCAGGCAAAGCAAAAGCAAGGATGTCACTTGGGTACGCACAGAAGCTGTCAAAGAAAGAAGATGTGGGTGCTGTTGGAATGCCTGAGTTCTTTGACCCTCCTTACATTCTCCAGTACAAGGTTGAGCAACTTGCAGTGATTATACAGAAGAGTAAACATTTAGTAGCCTTTACAGGAGCTGGAATATCAACTTCTTGTGGTATACCAGATTTCCGAGGTCCTAAAGGAATTTGGACTCTCCAGCGACAAGGCAAGGATGTTCCTGAAGCATCACTGCCATTTGATCGTGCTATGCCAAGCTTGACTCATATGGCATTGGTTGAACTAGAAAAGGCTGGAATTTTAAAATTTGTTATCAGCCAGAATGTGGATGGGCTGCATATCCGTTCTGGTCTATCAAGAGAAAAAGTTGCCGAGCTGCATGGGAACTCATTTAGGGAAGTTTGTCCTTCGTGTGGTATGGAGTATTTGCGGGATTTTGAAGTGGAAACTGTTGGGTTGAAGCAAACACCTCGTCGTTGCTCAGATGAGAAGTGCAAAGCTAGACTAAGGGATAGTGTTCTTGATCGGGAGGATGAATTGCCTAGTAAGGAGATGAATCTGGCTGAGAAACATTGTGAGATGGCCGATGTTGTATTGTGTTTAGGAACGAGTTTGCAGATAACTCCAGCTTGTGATATTCCTCTTAAAGCTCTCCGCAACGGAGGGAAGGTTGTGATTGTGAATCTTCAGCAAACTCCTAAGGACAAACAAGCTAGTCTGGTGATCCACGGGCTTGTGGACGAGGTAGTTTTAGGGGTAATGAACTATCTGAATCTCCGCATTGCTCCCTTTGTTCGAGTTGATCTTTTCCAGATAGTATTTACAAGGTGCAACAGATTGTCAGATCAGCGATTCATGAAGTGGAGGCTTAGAGTGGCTAGTATACATGGTCAGAGTGCACCATTGCCTTTCATCAGATCAATTGAGGTTTCCTTCCCTGGGAGGCCAGAACTAAAGATTGCTAATGGTGATGTTGTCAATGATTCCCACACTGAAATTATTGCTCTTCGATATTTCTTAAGTTATGCACTAGAACTTCTCATGTCTGTGCCCTGGAGTTTGAGAGGGCTTTCCAGCGTGTTACAGCTGTTCAGAAGACAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_16780.p1 GENE.R_Transcript_16780~~R_Transcript_16780.p1 ORF type:5prime_partial len:407 (+),score=86.54,SIR2|PF02146.13|5.2e-06,SIR2|PF02146.13|1.7e-20 R_Transcript_16780:2-1222(+)
KKNKKETPFLCTPPRQSGTEQEKVISGKAKARMSLGYAQKLSKKEDVGAVGMPEFFDPPYILQYKVEQLAVIIQKSKHLVAFTGAGISTSCGIPDFRGPKGIWTLQRQGKDVPEASLPFDRAMPSLTHMALVELEKAGILKFVISQNVDGLHIRSGLSREKVAELHGNSFREVCPSCGMEYLRDFEVETVGLKQTPRRCSDEKCKARLRDSVLDREDELPSKEMNLAEKHCEMADVVLCLGTSLQITPACDIPLKALRNGGKVVIVNLQQTPKDKQASLVIHGLVDEVVLGVMNYLNLRIAPFVRVDLFQIVFTRCNRLSDQRFMKWRLRVASIHGQSAPLPFIRSIEVSFPGRPELKIANGDVVNDSHTEIIALRYFLSYALELLMSVPWSLRGLSSVLQLFRRQ*

Click here to download the sequence:
Link to NCBI Protein BLAST