Transcript Information: R_Transcript_1680.p1


Annotated TAIR IDAT3G61790.1
Annotated Gene NameProtein with RING/U-box and TRAF-like domains
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22871974-22873543 | Reverse length=326
E-Value1.2E-208
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 136.839817536658
Replicate 220.932287305273
Replicate 328.563584380568
Condition 2: 8 Hour
Replicate 125.083081165471
Replicate 221.883667899453
Replicate 332.54008245362
Condition 3: 24 Hour
Replicate 134.786677415149
Replicate 228.779423186485
Replicate 334.900212046486


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_1680.p1 GENE.R_Transcript_1680~~R_Transcript_1680.p1 ORF type:complete len:328 (+),score=45.80,Sina|PF03145.12|1.6e+03,Sina|PF03145.12|1.6e+04,Sina|PF03145.12|6.2e-77 R_Transcript_1680:1112-2095(+)
ATGGACCTTGATAGTATTGAGTGTGTATCTTCAGTGGATGGAATGGATGATGAAGAGATCCCTCATTTAGATAGTAGCCACCATAACAATAACAACAATAACAATCACCAGTTTTCATTAAAGCCAAGGAATAATAATTTGGGGGTTCCTACAGCAATTGCACCTGCCACCAGTGTTCATGAGTTGCTTGAATGTCCTGTTTGTACCAATTCTATGTACCCTCCCATCCATCAGTGCCACAATGGACATACGCTGTGCTCTACCTGTAAAGCAAGGGTTCACAACCGATGCCCCACTTGTCGGCAGGAGCTTGGTGATATTAGGTGCTTAGCACTGGAGAAGGTGGCTGAGTCACTTGAATTGCCGTGTAAATATTACAATTTGGGATGTCCAGAAATATTTCCTTATTACAGCAAACTCAAGCACGAGGCAGTGTGCAATTTTAGGCCATACAGCTGCCCTTATGCTGGATCAGAGTGCTCGATTGTTGGGGATATCCCCTTCTTGGTTTCCCATCTGAGGGATGATCACAAGGTGGACATGCACAGCGGATGTACTTTCAACCATCGTTATGTAAAACCCAATCCCCGGGAAGTGGAAAATGCAACCTGGATGTTAACAGTCTTCCATTGTTTTGGTCAATACTTCTGCCTTCACTTTGAAGCATTCCAGCTTGGCATGGCCCCTGTATACATGGCATTTCTCCGTTTCATGGGTGACGAAAATGAGGCCAGAAACTACAGCTACAGCCTCGAAGTCGGTGGCAATGGGAGGAAACTCACATGGGAAGGTACCCCTCGAAGCATCCGAGATAGCCACAGGAAGGTTAGAGACAGCCATGACGGTCTTATCATCCAACGAAACATGGCTCTCTTCTTTTCCGGTGGCGATAGGAAGGAGTTAAAACTTAGGGTAACTGGCAGAATATGGAAAGAGCAGCAGAGCCCTGATGCTGCTCCTTGCATACCAAATATGTGTTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_1680.p1 GENE.R_Transcript_1680~~R_Transcript_1680.p1 ORF type:complete len:328 (+),score=45.80,Sina|PF03145.12|1.6e+03,Sina|PF03145.12|1.6e+04,Sina|PF03145.12|6.2e-77 R_Transcript_1680:1112-2095(+)
MDLDSIECVSSVDGMDDEEIPHLDSSHHNNNNNNNHQFSLKPRNNNLGVPTAIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYNLGCPEIFPYYSKLKHEAVCNFRPYSCPYAGSECSIVGDIPFLVSHLRDDHKVDMHSGCTFNHRYVKPNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARNYSYSLEVGGNGRKLTWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQSPDAAPCIPNMCC*

Click here to download the sequence:
Link to NCBI Protein BLAST