Transcript Information: R_Transcript_168070.p1


Annotated TAIR IDAT3G20980.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7355963-7357966 | Forward length=405
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.54896123172086
Replicate 20.55253422148153
Replicate 30.60280888410928
Condition 2: 8 Hour
Replicate 10.46026061930912
Replicate 20.33625386227347
Replicate 30.61415223903565
Condition 3: 24 Hour
Replicate 11.0356905516257
Replicate 20.66331605685947
Replicate 30.4114230204304


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_168070.p1 GENE.R_Transcript_168070~~R_Transcript_168070.p1 ORF type:complete len:266 (+),score=39.16,gag_pre-integrs|PF13976.2|2.2e-14,rve|PF00665.22|3e-14 R_Transcript_168070:1102-1899(+)
ATGACAAATAATTCAAGCATCTTTTCCAAGCTCGACACCTCTATCAACATTCCAGTTCGGATGGGCAACGGGGCTGTTGTACAGTCAACTGGCAGAGGCACTATCGCAGTCCAAACAAAGAAAGGTACTATGTACATCAATGATGTTTTTCTTGTTCCAGATCTTGATGAAAATCTGCTAAGTGTACCGCAAATGATTAAAAATGGTTACTCGCTAGTTTTTGAGGATAACCATTGCACTATATTTGATTCGGAAAAGAAAGAAATCGTCAAAGTTGCCATGGAAAATAAGAGCTTCCCTCTAAAGTGGGAATATCCTAAGGAGACAGCAGGCAAAGTTATCATTGATGACACTTGGTTATGGCATAGAAGGTATGGACACTTTAATGTGCGTGCCCTTAATGACCTTCACAACAAAGGGATGGTGAGAGACTTTCCTAACATTCTTCTGTCCAAGGACCTATGTGAAGCATGCCAACTTGGGAAGCAACATAGGAAGCCGTTCCCTAAGGAGAAAGTTTGGCGAGCCATTGAGAAGTTGGAGCTTATTCACACTGATGTTTGTGGGCCACATCCGACAATATCTCTTAGTGGGAATCGTTATTTTATCCTCTTCATTAATGATTTCACTCGCATGACGTGGGTGTACTTCATGAAGGAAAGGTCCCAAGTGTCCATTATCTTCAAAAGGTTCAAGTCCTTTGTAGAAACTCAAAGTGGGTGCAAACTGAAGAAAATCAGGTCTGATAGGGGTAAAGAATATACCTCATCAGAATTTGATAAATTTTGTGAAGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_168070.p1 GENE.R_Transcript_168070~~R_Transcript_168070.p1 ORF type:complete len:266 (+),score=39.16,gag_pre-integrs|PF13976.2|2.2e-14,rve|PF00665.22|3e-14 R_Transcript_168070:1102-1899(+)
MTNNSSIFSKLDTSINIPVRMGNGAVVQSTGRGTIAVQTKKGTMYINDVFLVPDLDENLLSVPQMIKNGYSLVFEDNHCTIFDSEKKEIVKVAMENKSFPLKWEYPKETAGKVIIDDTWLWHRRYGHFNVRALNDLHNKGMVRDFPNILLSKDLCEACQLGKQHRKPFPKEKVWRAIEKLELIHTDVCGPHPTISLSGNRYFILFINDFTRMTWVYFMKERSQVSIIFKRFKSFVETQSGCKLKKIRSDRGKEYTSSEFDKFCEE*

Click here to download the sequence:
Link to NCBI Protein BLAST