Transcript Information: R_Transcript_168081.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value0.0005
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0864857711142
Replicate 21.7496917013582
Replicate 31.9088947996794
Condition 2: 8 Hour
Replicate 11.7489903533747
Replicate 20.79860292289948
Replicate 30.64827180787096
Condition 3: 24 Hour
Replicate 11.3665361445062
Replicate 22.8881886642423
Replicate 30.78170373881776


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_168081.p1 GENE.R_Transcript_168081~~R_Transcript_168081.p1 ORF type:5prime_partial len:84 (+),score=7.27,gag_pre-integrs|PF13976.2|1.1e-11,gag_pre-integrs|PF13976.2|3.2e+03 R_Transcript_168081:3-254(+)
TATTACAGGCCATTGACACTTGCTTCTTCCGCAGCCGTGACAACATCTTCAGATTCTATTGAATTATGGCATCAACGTTTGGGACATCCATCAAGCAAGCAACTTTCATTTGTTCCTGTAGTTCAGTCTAGTTCACAAAAACAAAATAAACTTTGTGATGTTTGTTGTCGAGCTAAACAAACTCGAACTAGTTTCCCTACAAGTGACTATCAAGCTAAAGATTGTTTTCAATTAATTCATTGTGATATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_168081.p1 GENE.R_Transcript_168081~~R_Transcript_168081.p1 ORF type:5prime_partial len:84 (+),score=7.27,gag_pre-integrs|PF13976.2|1.1e-11,gag_pre-integrs|PF13976.2|3.2e+03 R_Transcript_168081:3-254(+)
YYRPLTLASSAAVTTSSDSIELWHQRLGHPSSKQLSFVPVVQSSSQKQNKLCDVCCRAKQTRTSFPTSDYQAKDCFQLIHCDI*

Click here to download the sequence:
Link to NCBI Protein BLAST