Transcript Information: R_Transcript_168395.p4


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.18342334347
Replicate 27.7212201530903
Replicate 35.1724891346151
Condition 2: 8 Hour
Replicate 16.1609595673714
Replicate 25.9148139063781
Replicate 35.855358264641
Condition 3: 24 Hour
Replicate 18.1463186937015
Replicate 26.4031396779095
Replicate 36.3544949090992


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_168395.p4 GENE.R_Transcript_168395~~R_Transcript_168395.p4 ORF type:complete len:155 (+),score=10.82,zf-RVT|PF13966.2|2.4e-13,zf-RVT|PF13966.2|9.4e+02 R_Transcript_168395:3241-3705(+)
ATGATTCCCAAACATCAAGTTATTATGTGGACGGCTTGGAAAAGAGCCTTGCCTACTATTGATAAGTTGTGCTCCAGGGGAATTATGTTGGTTAATAGATGTGAACTTTGCCAGGGTGCACTAGAATCCCATGAGCACTTGTTCTTTCAGTGCCCTACTACTGCTGTCATATGGGAACAAATTCTTAGGTGGCTTGGATTTACCAGACATGGATTCAGTCTATGGAGTGAATTGAGATGGTCTTCTAAAAATATTAGAGGCAAAGGATGGGAAAAGAAGTGGTACAGGATGGCTTTGTGCACTACTAAATATGAGATATGGCATCAACGAAACTCTCGTATCTTTATTGGTCTATGTAGACAGCTGAAGCATATTGTTATCCGGATCCAGTTTTTGATCTGTTATCGACTGCTATACCTCTGTACAAAAGATGGCCATATTATAGAGAGGAAGCTGCTTGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_168395.p4 GENE.R_Transcript_168395~~R_Transcript_168395.p4 ORF type:complete len:155 (+),score=10.82,zf-RVT|PF13966.2|2.4e-13,zf-RVT|PF13966.2|9.4e+02 R_Transcript_168395:3241-3705(+)
MIPKHQVIMWTAWKRALPTIDKLCSRGIMLVNRCELCQGALESHEHLFFQCPTTAVIWEQILRWLGFTRHGFSLWSELRWSSKNIRGKGWEKKWYRMALCTTKYEIWHQRNSRIFIGLCRQLKHIVIRIQFLICYRLLYLCTKDGHIIERKLLV*

Click here to download the sequence:
Link to NCBI Protein BLAST