Transcript Information: R_Transcript_168409.p1


Annotated TAIR IDAT3G23330.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:8347200-8349347 | Forward length=715
E-Value3.8e-316
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.77769507827122
Replicate 20.55253422148153
Replicate 30.77503999385478
Condition 2: 8 Hour
Replicate 10.42957657802185
Replicate 20.42031732784183
Replicate 30.84161603127107
Condition 3: 24 Hour
Replicate 10.94938300565694
Replicate 20.63567788782366
Replicate 31.042271651757


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_168409.p1 GENE.R_Transcript_168409~~R_Transcript_168409.p1 ORF type:complete len:798 (+),score=121.16,PPR|PF01535.16|76,PPR|PF01535.16|0.001,PPR|PF01535.16|1e+02,PPR|PF01535.16|1.4e-05,PPR|PF01535.16|0.57,PPR|PF01535.16|1.4e-06,PPR|PF01535.16|3,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|0.024,PPR|PF01535.16|1.8,PPR|PF01535.16|5.3,PPR|PF01535.16|15,PPR|PF01535.16|2.2e+03,DYW_deaminase|PF14432.2|1.3e-44,PPR_2|PF13041.2|9.5e+03,PPR_2|PF13041.2|0.41,PPR_2|PF13041.2|45,PPR_2|PF13041.2|1.1e-07,PPR_2|PF13041.2|27,PPR_2|PF13041.2|9.1e-09,PPR_2|PF13041.2|53,PPR_2|PF13041.2|5.5e-09,PPR_2|PF13041.2|0.017,PPR_2|PF13041.2|98,PPR_2|PF13041.2|1.8e+02,PPR_2|PF13041.2|2.6e+02,PPR_2|PF13041.2|2.5e+02,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|30,PPR_3|PF13812.2|4.9e+03,PPR_3|PF13812.2|4.9e+03,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|0.036,PPR_3|PF13812.2|7.6e+03,PPR_3|PF13812.2|0.3,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|38,PPR_3|PF13812.2|1.3e+02,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|0.035,PPR_1|PF12854.3|5.2,PPR_1|PF12854.3|0.0037,PPR_1|PF12854.3|3.3e+03,PPR_1|PF12854.3|2.2e+02,PPR_1|PF12854.3|0.0041,PPR_1|PF12854.3|0.79,PPR_1|PF12854.3|0.38 R_Transcript_168409:136-2394(+)
ATGGGAACAACAGCCACATTTTCATCTTCAACTGTAATCCTCAAGAAACTTCTAAAGACCCCAACTTCCATTACCTCAAAAACCCAAGCCCAACAACTCCATGCCCAGATCATCAAACACAAAGGACTCAACCCCCATTACCTCTCCACCCTTCTTTCTATTTACTCTAACCTCAATCTCTTACCTGAATCACTCAAGATTTTCAATGCCCTTCATTCTCCCCCTTCTCTTGCTTGGAAATCTATCATTAGATGCTACACTTCTTGCGGCTTTTCTTTCGAATGTTTGTCTTGTTTTAATCAAATGAGAGCTTCTGGGCTTTGCCCTGATCATAATGTCCTCCCCTCTGTGATAAGGTCATGTACTTTGTTGAAAAGCTTGAGACTTGGTGAATCTGTTCATTGTTGTGTTATACATGCTGGTCTTGATATTGATATTTATACTTGTAATGCCCTTATGAACATGTATTCAAAATTGGAAAGTGGGTATGGAAGTGGGGAGGACAGAGGTCATGCCCGCCAACCGTTCGACGTAATGCCTCAACGAAATTTGATAGGTAGGAGCTTGGGTGATGATCATGTGATTGACCAATTTGAAAAAGGGGTGGTGAGTTTCCATCCAAAGTTTGATGTGGATATAATAGGTAGTGATGTTAATAGTGCTAAGAGCACTAGAGTAGGTTCGAGGAAAAATGGGGTACAGAAGGTATTTGAGATGATGGCAGTGAGAGATCTTGTGTCTTGGAACACTGTTATTGCAGCAAATGCACAAAATGGGATGTTTGAAGAAGCTTTAGATATGATTAGGAGCATGGGAAATGCAAACCTGAAGCCGGATGCTTTTAGTCTTTCCAGTGTGCTACCTATGTTTGCAGAACTTGCTGATGTCCATAGGGGGAAGGAAATTCATGGCTTTGCAATGAGGAACAGACTTGATGCCCATTTGTACGTTGGAAGTGGCTTGATTGACATGTATGCAAAGTGTAATCGAATAGAGGATGCACACAAGATGTTTGTTATGTTACCTTGTCGTGATAGCATTTCGTGGAACTCTATCATAGCAGGGTGTGTGCAAAATGGTTTCTTTGATGATGGTCTGAGACTGTTTAGGGAGATGATAATGGCCAAGGTTAAGCCTGGGAATGTTTCATTTTCAAGCATCATTCCAGCTTGTGCACATCTAACAACACTACGTTTAGGGAAACAATTACATGGATACATAATTAGGTGTAGATTCGAGGAGAATGTACTTATAGCTAGTTCATTAGTGGACATGTATGCAAAATGTGGTCACATAAAGATTGCTAGGTGTATATTCAATAAAATAAAGCTTCACGACACAGTGTCATGGACAGCCATGATCATGGGCTATGCTGTACATGGGCATGCTCATGATGCCCTTTCCTTATTTAAGCAAATGGAAATCGTGGGAGTAAAACCCAACTCTGTTGCTTTTGTAGCTGTTTTAACTGCTTGCAGTCATGCAGGTTTGGTAGATGAAGCCCAAAATTACTTTAACAGGATGACCCATGATTATCAGCTATCTCCACACTTGGAGCACTATGCTGCAGTAGCGGACCTTCTTGGCCGATCTGGAAGGTTGAAGGAAGCTTATGATTTTGTCCGTAAGATGACTGATCCGACAGGCAGTGTTTGGTCCACATTGCTTGCTGCTTGCCGAGTGCATAAAAATGTTGAAATGGCTGAAAAGGTTGCAAACGAATTATTCAGAGTTGATCCCAAAAACATGGGAGCTTATGTTCTCATGTCAAACATATACTCTGCTGCAAAGAGATGGAAAGAGGCTGCACAGGTGAGAATAGCCATGAGGAACAAAGGCATAAAAAAGAAACCTGCTTGCAGCTGGATTGAAGTCAAAAATAAGTTACATGCTTTTGTAGCTGGAGATAAATCTCATCCATATTATGACCAGATAAAGAAGGCTTTAGATGACTTACTGGAGCGGATGGAGAAAGAAGGCTATGTTCCTGACACAAGCGAGGTGCTTCATGATGTAGATGAGGAGTATAAGAAGACATTGCTCTTTAGTCATAGTGAGAGACTGGCCATTGCATTTGGCATAATAAGTACTCCTGAGGGAATGACAGTATGTGTGACCAAGAACATACGGGTATGCATCGATTGCCATAATGCTATCAAGTTTATGTCCAAAATTGTTGGGAGGGAAATCGTTGTTAGGGATAATAGTAGGTTTCATCATTTCAAAGATGGCAAGTGTTCATGTGGAGATTATTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_168409.p1 GENE.R_Transcript_168409~~R_Transcript_168409.p1 ORF type:complete len:798 (+),score=121.16,PPR|PF01535.16|76,PPR|PF01535.16|0.001,PPR|PF01535.16|1e+02,PPR|PF01535.16|1.4e-05,PPR|PF01535.16|0.57,PPR|PF01535.16|1.4e-06,PPR|PF01535.16|3,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|0.024,PPR|PF01535.16|1.8,PPR|PF01535.16|5.3,PPR|PF01535.16|15,PPR|PF01535.16|2.2e+03,DYW_deaminase|PF14432.2|1.3e-44,PPR_2|PF13041.2|9.5e+03,PPR_2|PF13041.2|0.41,PPR_2|PF13041.2|45,PPR_2|PF13041.2|1.1e-07,PPR_2|PF13041.2|27,PPR_2|PF13041.2|9.1e-09,PPR_2|PF13041.2|53,PPR_2|PF13041.2|5.5e-09,PPR_2|PF13041.2|0.017,PPR_2|PF13041.2|98,PPR_2|PF13041.2|1.8e+02,PPR_2|PF13041.2|2.6e+02,PPR_2|PF13041.2|2.5e+02,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|30,PPR_3|PF13812.2|4.9e+03,PPR_3|PF13812.2|4.9e+03,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|0.036,PPR_3|PF13812.2|7.6e+03,PPR_3|PF13812.2|0.3,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|38,PPR_3|PF13812.2|1.3e+02,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|0.035,PPR_1|PF12854.3|5.2,PPR_1|PF12854.3|0.0037,PPR_1|PF12854.3|3.3e+03,PPR_1|PF12854.3|2.2e+02,PPR_1|PF12854.3|0.0041,PPR_1|PF12854.3|0.79,PPR_1|PF12854.3|0.38 R_Transcript_168409:136-2394(+)
MGTTATFSSSTVILKKLLKTPTSITSKTQAQQLHAQIIKHKGLNPHYLSTLLSIYSNLNLLPESLKIFNALHSPPSLAWKSIIRCYTSCGFSFECLSCFNQMRASGLCPDHNVLPSVIRSCTLLKSLRLGESVHCCVIHAGLDIDIYTCNALMNMYSKLESGYGSGEDRGHARQPFDVMPQRNLIGRSLGDDHVIDQFEKGVVSFHPKFDVDIIGSDVNSAKSTRVGSRKNGVQKVFEMMAVRDLVSWNTVIAANAQNGMFEEALDMIRSMGNANLKPDAFSLSSVLPMFAELADVHRGKEIHGFAMRNRLDAHLYVGSGLIDMYAKCNRIEDAHKMFVMLPCRDSISWNSIIAGCVQNGFFDDGLRLFREMIMAKVKPGNVSFSSIIPACAHLTTLRLGKQLHGYIIRCRFEENVLIASSLVDMYAKCGHIKIARCIFNKIKLHDTVSWTAMIMGYAVHGHAHDALSLFKQMEIVGVKPNSVAFVAVLTACSHAGLVDEAQNYFNRMTHDYQLSPHLEHYAAVADLLGRSGRLKEAYDFVRKMTDPTGSVWSTLLAACRVHKNVEMAEKVANELFRVDPKNMGAYVLMSNIYSAAKRWKEAAQVRIAMRNKGIKKKPACSWIEVKNKLHAFVAGDKSHPYYDQIKKALDDLLERMEKEGYVPDTSEVLHDVDEEYKKTLLFSHSERLAIAFGIISTPEGMTVCVTKNIRVCIDCHNAIKFMSKIVGREIVVRDNSRFHHFKDGKCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST