Transcript Information: R_Transcript_168411.p1


Annotated TAIR IDAT3G21470.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:7563503-7565074 | Forward length=523
E-Value2.9E-184
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2404924920683
Replicate 20.36692563834307
Replicate 30.66718653192677
Condition 2: 8 Hour
Replicate 10.85581663893284
Replicate 20.95522213690502
Replicate 31.3745879887283
Condition 3: 24 Hour
Replicate 11.6939741255393
Replicate 20.85651490837193
Replicate 31.6575155005612


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_168411.p1 GENE.R_Transcript_168411~~R_Transcript_168411.p1 ORF type:complete len:515 (+),score=104.99,PPR|PF01535.16|1.2e+04,PPR|PF01535.16|0.0046,PPR|PF01535.16|0.00051,PPR|PF01535.16|1.5e-05,PPR|PF01535.16|1.3e-09,PPR|PF01535.16|3.6e-06,PPR|PF01535.16|3.8e-08,PPR|PF01535.16|2.3,PPR|PF01535.16|0.044,PPR|PF01535.16|2.6e-06,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.039,PPR|PF01535.16|2.6,PPR_2|PF13041.2|7.8,PPR_2|PF13041.2|1.4e-05,PPR_2|PF13041.2|0.00026,PPR_2|PF13041.2|1.5e-07,PPR_2|PF13041.2|0.00032,PPR_2|PF13041.2|1.1e-12,PPR_2|PF13041.2|5.2,PPR_2|PF13041.2|1.1e-08,PPR_2|PF13041.2|0.1,PPR_2|PF13041.2|1.5,PPR_2|PF13041.2|4.6,PPR_1|PF12854.3|7.4,PPR_1|PF12854.3|0.06,PPR_1|PF12854.3|0.0016,PPR_1|PF12854.3|6.8e-08,PPR_1|PF12854.3|4.9e-06,PPR_1|PF12854.3|0.0035,PPR_1|PF12854.3|27,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|0.0057,PPR_1|PF12854.3|27,PPR_1|PF12854.3|0.0041,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|42,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|1,PPR_3|PF13812.2|0.0001,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|0.046,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|66,PPR_3|PF13812.2|37,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|0.39,PPR_3|PF13812.2|3.8 R_Transcript_168411:171-1715(+)
ATGACAAAAAGCTCAAATTTTTATCACCTTGTAAGGGATTTCATCCCCAAAGGGTCACCAAGAAAAGCCCTTGTTCTTTATTCCCAAAATCGTAGCCAAGGTTTAAGTGTTCTAGACGTAGTCCCTTTAATACTCAAGGCCTGTGCTAGTCTTTGCATGACCCATCATGGGAAAGCCTTGCACGCAGAATCAGTCAAGTTTGGGGTTAATTCTGATGTAAAGGTTGGATCTTCATTGGTGGGCATGTATGCAAAATGTGGGTGTATGGTTGATGCACGTAAGGTGTTTGATTTAATGCCCCAGAGAAATGTAGTCACTTGGAATGCACTGGTGGCTGGGTACTTGGCAAGTAAAGATACAAGAACTGCACTTTGTTTGTTTGATAGTATGGAGGAGAGGACTGTGGTGACTTGGAACGAGATGATTCGCGGGTTGGCCAAGAATGGAGATATGATCATGGCTAGGGAGTTGTTTGAAAGGGTTCCTGTTGAGATGAGGACTGTTGTTACTTGGACTGTTATGGTTGATGGGTATGCTAGCAATGGGGATATGGAGGCTGCCAAGGAAGTTTTTGAGGAGATGCCTAAACGGAACTGTTTTGTTTGGTCTGTTATGATCAATGGATATTGCAAGCAAGGTGATGTTGAGAAAGCTAGGAATATCTTTTGTGTATGCTCTCAACGGAACTTGGTGGTTTGGAATTCATTGATATCTGGGTTGGTTCGAAATGGGTTCTGTGAACAAGCCATTGAAGCATACCATGAAATGCAAAAGGAAGGGTTTCAACCAGATGAAGTGACAGTAGCAAGCATTTTGTCTGCTTGTTCGCAGTTGGGATTGTTGGATGTCGGTAAAGAGGTCCATGAAATGATCTTTGAGAAGGGAATAAAGCTTAACCAGTTTGTACTGAATGGTTTAGTGGACATGTATGCAAAATGTGGGGATTTGGGGACGGCTAGATCAATTTTTGAAGGAATGTCTCAAAGAAATGCTACCTGCTGGAATTCAATGATATGTGGTTTTGCTGTTCATGGAAAATGTCAGGATGCTGTTAACTTCTTTCATGAAATGGAGGTTACGGGTGTGATACCGGATGAGATTTCATTCCTATCTGTTCTTTCGGCTTGTGCTCATGGTGGTCTAGTACAAAAGGGTTTGAATATATTCTCAAAGATGAAGAAATATGGAGTAGAAGCAGGTGTTAAGCATTATGGTTGCATAGTTGATCTGCTTGGAAGAGCAGGAAGGTTGAAAGAGGCGTTTGCTTTAGTCAAGAGTATGCCAATGAAACCAAACGATACAATTTGGGGGTGTTTGCTTGGAGCTTGTCGCCTGCACTCAGAAGCGACCTTGGCAGAGGACGCACTGGAAGACATTAGCCACAGAGATTATGGAAGGGGTTCCCATTATGTTCTCCTATCTAACATTTATGCTGCTTCAGACCGATGGGAGAAGGCGGAGAAAATAAGAGCATCTATGACTGACAAAGGACTGCAAAAGACTCCAGGGTCGAGTTCACTGATGCTAAATGACCTGCCAGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_168411.p1 GENE.R_Transcript_168411~~R_Transcript_168411.p1 ORF type:complete len:515 (+),score=104.99,PPR|PF01535.16|1.2e+04,PPR|PF01535.16|0.0046,PPR|PF01535.16|0.00051,PPR|PF01535.16|1.5e-05,PPR|PF01535.16|1.3e-09,PPR|PF01535.16|3.6e-06,PPR|PF01535.16|3.8e-08,PPR|PF01535.16|2.3,PPR|PF01535.16|0.044,PPR|PF01535.16|2.6e-06,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.039,PPR|PF01535.16|2.6,PPR_2|PF13041.2|7.8,PPR_2|PF13041.2|1.4e-05,PPR_2|PF13041.2|0.00026,PPR_2|PF13041.2|1.5e-07,PPR_2|PF13041.2|0.00032,PPR_2|PF13041.2|1.1e-12,PPR_2|PF13041.2|5.2,PPR_2|PF13041.2|1.1e-08,PPR_2|PF13041.2|0.1,PPR_2|PF13041.2|1.5,PPR_2|PF13041.2|4.6,PPR_1|PF12854.3|7.4,PPR_1|PF12854.3|0.06,PPR_1|PF12854.3|0.0016,PPR_1|PF12854.3|6.8e-08,PPR_1|PF12854.3|4.9e-06,PPR_1|PF12854.3|0.0035,PPR_1|PF12854.3|27,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|0.0057,PPR_1|PF12854.3|27,PPR_1|PF12854.3|0.0041,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|42,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|1,PPR_3|PF13812.2|0.0001,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|0.046,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|66,PPR_3|PF13812.2|37,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|0.39,PPR_3|PF13812.2|3.8 R_Transcript_168411:171-1715(+)
MTKSSNFYHLVRDFIPKGSPRKALVLYSQNRSQGLSVLDVVPLILKACASLCMTHHGKALHAESVKFGVNSDVKVGSSLVGMYAKCGCMVDARKVFDLMPQRNVVTWNALVAGYLASKDTRTALCLFDSMEERTVVTWNEMIRGLAKNGDMIMARELFERVPVEMRTVVTWTVMVDGYASNGDMEAAKEVFEEMPKRNCFVWSVMINGYCKQGDVEKARNIFCVCSQRNLVVWNSLISGLVRNGFCEQAIEAYHEMQKEGFQPDEVTVASILSACSQLGLLDVGKEVHEMIFEKGIKLNQFVLNGLVDMYAKCGDLGTARSIFEGMSQRNATCWNSMICGFAVHGKCQDAVNFFHEMEVTGVIPDEISFLSVLSACAHGGLVQKGLNIFSKMKKYGVEAGVKHYGCIVDLLGRAGRLKEAFALVKSMPMKPNDTIWGCLLGACRLHSEATLAEDALEDISHRDYGRGSHYVLLSNIYAASDRWEKAEKIRASMTDKGLQKTPGSSSLMLNDLPE*

Click here to download the sequence:
Link to NCBI Protein BLAST