Transcript Information: R_Transcript_16847.p1


Annotated TAIR IDAT1G65540.1
Annotated Gene NameLETM1-like protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:24362382-24366011 | Reverse length=736
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.321034756755
Replicate 218.697640023592
Replicate 323.090236161676
Condition 2: 8 Hour
Replicate 124.224333679451
Replicate 228.242181871511
Replicate 335.018794855086
Condition 3: 24 Hour
Replicate 130.191508837501
Replicate 227.120017941551
Replicate 331.472707540438


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_16847.p1 GENE.R_Transcript_16847~~R_Transcript_16847.p1 ORF type:complete len:749 (+),score=201.33,LETM1|PF07766.9|4.8e-108,LETM1|PF07766.9|3.8e+02,EF-hand_7|PF13499.2|6.8e+03,EF-hand_7|PF13499.2|4.5e+02,EF-hand_7|PF13499.2|1.4e-06 R_Transcript_16847:490-2736(+)
ATGGCAGCTAGAGCAATCTTGCGAAGGACAAGATCCCTTGTTGATGCATTAAATCAGCCTTGCGGTTCATTGCGCAGTTTCTCAGGTTTTGAGCATGGAAATTCATCTTCAGTTCCTAATTCATGGGATTCAAGTTGTGCCATCCTTCCTTCTACAAATTCTAGTTCGACTGAAGAAAGGGAATCATCTTCAATAACCAGAGATAAGTTACAGCTTTTCTCTACTGTGGGACTTCTACGAAATCCCGGTGGGAGTTCAGCTCTTAGATTGGTTAATCCACACCCATACTATGGATCTTCTTTGGGAGCCACTTGGTTATCACAAACATTGCACTATTCTTCGACAGCAACAGCTGGTCAGCCAGAGTTCCGGGATAACAATGGTAAAAATGAAGAAAAGGCTGCTACTCAATCTAAGGAACCCTCACCTGAAGACTGTGATCAGGCAGTCGAAGGTTTGAGTTCAGCTCAAGCTAAAGCCAAAGCTAAGCAATTGCAGGAATCACAAAAGAGTGAAAAATCTATATTACAAAGATTATGGGCTAAACTTTTAGGGATTGGTCCTGCTTTGAGGGTAATAGCTTCAATGAGCAGAGCGGATTGGGCTGATAAGCTTCGCCATTGGAAGGATGAATTTAAATCTACAATGCAACACTATTGGTTGGGCACAAAATTACTCTGGGCTGATGTTAGGATTAGCTCAAGATTACTGTTGAAGCTTGCTAGTGGGAAGAGTTTATCAAGGAGGGAGAGACAACAACTCACCCGCACTACAGCTGATATCTTCAGGCTAGTTCCCGTTGCAGTTTTCATTATAGTTCCGTTCATGGAGTTCTTACTTCCGGTATTTTTGAAACTATTTCCCAACATGTTGCCATCAACCTTTCAAGACAAGATGAAGGAACAGGAGGACTTGAAAAGGAGATTAAACGCTAGAATCGAGTATGCCAAGTTTCTACAGGACACGGTCAAAGAAATGGCCAAGGAAGTTAAGAATTCCCGTACTGGAGAAATTCAGCAAACTGCAGAGGATCTTGATGAGTTCATGAACAAAGTTAGGAGGGGTGAAGATGTCTCCAATGATGAAATTTTGGGTTTTGCTAAGTTGTTCAATGATGAGTTGACTCTAGATAACATCAGCAGGCCTCGATTGGTAAATATGTGCAAATACATGGGTATCACCCCATTTGGAACTGATGCATATTTGCGTTTTATGCTTCGGAATAAGCTTCGAAAGATAAAAGAAGATGATCAGATGATTCAAGCTGAGGCTGTTGAGTCACTTTCAGAGGCGGAGCTTCGTCAAGCTTGTAGAGATAGAGGTTTGCTTGGCTTACTTTCGGTTGAAGAAATGCGTCAACAGCTGCGTGATTGGCTGGACTTATCTCTCAATCACTCTGTTCCATCATCTCTTTTAATTCTTTCTAGAGCCTTCAATGTGTCTGGAAAAATCAAGCCTGAAGAAGCTGTGGAAGCTGCACTTTCCTCTTTGCCTGATGAGGTTGTTGATACTGTTGGAGCGACATCCTTGCCGTCTGAGGATACAGTTGCAGAGAGGAGGAGAAAATTAGAGTTCCTTGAAATGCAGGAAGAAATGATTAAGGAGGAAGAGAAAAAGAAACTGGAAGAGGAGAAGGCCAAGCTGAAGGAGGACAAGGCCTTGGAAGAGATGTTGGGTCCAACTGCCAGGGAGGAACAAGAACGTGCAAAAGCTAAATTACCTGATACAGAGGACCAACTCTGCGAGCTCAGTCGTGCATTGGCTGTTCTAGCTTCTGCATCTTCAGTTAGCAGAGAGCGGGCGGAGTTCTTGAGACTTGTCAATAAGGAGATAGAATTATACAATAGTATGGTGGACAAGGAGGGTAATGAAGGGCAAGTTCAAGCTGAGAAGGCTTACAGGGCTGCTCGGGAGGAAAGTGAAGATCATGCTGAGACATCTGCAGTTACTAACGCGCTTATAGACAGGGTTGCTGCTATGCTTCAAAAACTGGAAAAAGATATCGATGATGTGGATGCTAAAATTGGTGATCGTTGGCAATTACTAGATAGGGATTGTGATGGAAAGGTGACTCCGGAAGAGGTGGCTTCTGCCGCTGCATATCTCAGAGAGACGTTGGACAAAGATGGCATCCAAGAGGTTGTCAGCAAGCTCTCAAAAGACAGAGATGGAAAGATACTCGTGGAAGACATTGTTAGGCTAGGCAGTCAGAAAGAAGACAGTGAATCAGCGGAATCAGAAAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_16847.p1 GENE.R_Transcript_16847~~R_Transcript_16847.p1 ORF type:complete len:749 (+),score=201.33,LETM1|PF07766.9|4.8e-108,LETM1|PF07766.9|3.8e+02,EF-hand_7|PF13499.2|6.8e+03,EF-hand_7|PF13499.2|4.5e+02,EF-hand_7|PF13499.2|1.4e-06 R_Transcript_16847:490-2736(+)
MAARAILRRTRSLVDALNQPCGSLRSFSGFEHGNSSSVPNSWDSSCAILPSTNSSSTEERESSSITRDKLQLFSTVGLLRNPGGSSALRLVNPHPYYGSSLGATWLSQTLHYSSTATAGQPEFRDNNGKNEEKAATQSKEPSPEDCDQAVEGLSSAQAKAKAKQLQESQKSEKSILQRLWAKLLGIGPALRVIASMSRADWADKLRHWKDEFKSTMQHYWLGTKLLWADVRISSRLLLKLASGKSLSRRERQQLTRTTADIFRLVPVAVFIIVPFMEFLLPVFLKLFPNMLPSTFQDKMKEQEDLKRRLNARIEYAKFLQDTVKEMAKEVKNSRTGEIQQTAEDLDEFMNKVRRGEDVSNDEILGFAKLFNDELTLDNISRPRLVNMCKYMGITPFGTDAYLRFMLRNKLRKIKEDDQMIQAEAVESLSEAELRQACRDRGLLGLLSVEEMRQQLRDWLDLSLNHSVPSSLLILSRAFNVSGKIKPEEAVEAALSSLPDEVVDTVGATSLPSEDTVAERRRKLEFLEMQEEMIKEEEKKKLEEEKAKLKEDKALEEMLGPTAREEQERAKAKLPDTEDQLCELSRALAVLASASSVSRERAEFLRLVNKEIELYNSMVDKEGNEGQVQAEKAYRAAREESEDHAETSAVTNALIDRVAAMLQKLEKDIDDVDAKIGDRWQLLDRDCDGKVTPEEVASAAAYLRETLDKDGIQEVVSKLSKDRDGKILVEDIVRLGSQKEDSESAESER*

Click here to download the sequence:
Link to NCBI Protein BLAST