Transcript Information: R_Transcript_168683.p1


Annotated TAIR IDAT3G15580.1
Annotated Gene NameUbiquitin-like superfamily protein
Annotated Gene Symbol(s)ATG8I, APG8H
Annotation TypeOrtholog
Chromosome Positionchr3:5274075-5275000 | Reverse length=115
E-Value1.5E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.555929226825
Replicate 213.660243644339
Replicate 311.867345983549
Condition 2: 8 Hour
Replicate 113.127963736776
Replicate 215.086860037426
Replicate 315.636628425996
Condition 3: 24 Hour
Replicate 112.861904049256
Replicate 29.6989993916394
Replicate 314.10833976806


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_168683.p1 GENE.R_Transcript_168683~~R_Transcript_168683.p1 ORF type:5prime_partial len:166 (+),score=31.69,Atg8|PF02991.12|7.2e-43,APG12|PF04110.9|1.5e-05 R_Transcript_168683:2-499(+)
GGGGACGGTTCATTCATCCTCTCCGTTGTGCCATCTCACAGAAACACGCATCTATTCTATGATCTGAAAGAGATTACGATTTACGAACAGAACAGAAACACCAGGCACAGGCAGCCATTGGAGATGGGCAAGTTGCAACCTTTCAAGGACGAGTTCTCCTTCGAGGACAGGTTGAAGGAATCCACTGATATGCTTGCCAAATATCCTGACCGTGTCCCTGTGATTGCTGAAAAATACTCCAGAACTGACCTTCCTGAGTTGGAGAAGAAAAAATTTTTGGTACCAAGAGACATGTCTGTTGGGCATTTCATTCACATATTGAGTACCAGGCTCCAGCTCACTCCTGGCAAAGCTCTTTTTGTATTTGTCAAAGATACATTGCCCCAAACATCCTGTTTGATGGATTCCGTTTATGAATCATACAAGGATGATGATGGGTTTCTTTACATGTGCTACAGCAGCGAAAAGACCTTTGGTGGTGTTTCTTCTGCGGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_168683.p1 GENE.R_Transcript_168683~~R_Transcript_168683.p1 ORF type:5prime_partial len:166 (+),score=31.69,Atg8|PF02991.12|7.2e-43,APG12|PF04110.9|1.5e-05 R_Transcript_168683:2-499(+)
GDGSFILSVVPSHRNTHLFYDLKEITIYEQNRNTRHRQPLEMGKLQPFKDEFSFEDRLKESTDMLAKYPDRVPVIAEKYSRTDLPELEKKKFLVPRDMSVGHFIHILSTRLQLTPGKALFVFVKDTLPQTSCLMDSVYESYKDDDGFLYMCYSSEKTFGGVSSAV*

Click here to download the sequence:
Link to NCBI Protein BLAST