Transcript Information: R_Transcript_168685.p1


Annotated TAIR IDAT3G15580.1
Annotated Gene NameUbiquitin-like superfamily protein
Annotated Gene Symbol(s)ATG8I, APG8H
Annotation TypeOrtholog
Chromosome Positionchr3:5274075-5275000 | Reverse length=115
E-Value1.5E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.885802015164
Replicate 26.3241868723789
Replicate 310.349429636816
Condition 2: 8 Hour
Replicate 16.932744894702
Replicate 214.413339500041
Replicate 310.278622881424
Condition 3: 24 Hour
Replicate 18.8512027865847
Replicate 210.097588407734
Replicate 38.4386331322978


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_168685.p1 GENE.R_Transcript_168685~~R_Transcript_168685.p1 ORF type:5prime_partial len:166 (+),score=32.70,Atg8|PF02991.12|7.2e-43,APG12|PF04110.9|1.5e-05 R_Transcript_168685:3-500(+)
GGGACGGTTCATTCATCCTCTCCGTTGTGCCATCTCACAGAAACACGCATCTATTCTATCGATCTGAAAGAGATTACGATTTACGAACAGAACAGAAACACCAGGCACAGGCAGCCATTGGAGATGGGCAAGTTGCAACCTTTCAAGGACGAGTTCTCCTTCGAGGACAGGTTGAAGGAATCCACTGATATGCTTGCCAAATATCCTGACCGTGTCCCTGTGATTGCTGAAAAATACTCCAGAACTGACCTTCCTGAGTTGGAGAAGAAAAAATTTTTGGTACCAAGAGACATGTCTGTTGGGCATTTCATTCACATATTGAGTACCAGGCTCCAGCTCACTCCTGGCAAAGCTCTTTTTGTATTTGTCAAAGATACATTGCCCCAAACATCCTGTTTGATGGATTCCGTTTATGAATCATACAAGGATGATGATGGGTTTCTTTACATGTGCTACAGCAGCGAAAAGACCTTTGGTGGTGTTTCTTCTGTGGTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_168685.p1 GENE.R_Transcript_168685~~R_Transcript_168685.p1 ORF type:5prime_partial len:166 (+),score=32.70,Atg8|PF02991.12|7.2e-43,APG12|PF04110.9|1.5e-05 R_Transcript_168685:3-500(+)
GTVHSSSPLCHLTETRIYSIDLKEITIYEQNRNTRHRQPLEMGKLQPFKDEFSFEDRLKESTDMLAKYPDRVPVIAEKYSRTDLPELEKKKFLVPRDMSVGHFIHILSTRLQLTPGKALFVFVKDTLPQTSCLMDSVYESYKDDDGFLYMCYSSEKTFGGVSSVV*

Click here to download the sequence:
Link to NCBI Protein BLAST