Transcript Information: R_Transcript_16896.p1


Annotated TAIR IDAT5G43060.1
Annotated Gene NameGranulin repeat cysteine protease family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17269784-17272117 | Reverse length=463
E-Value3.6E-251
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 185.430164986772
Replicate 246.48209055444
Replicate 364.020126240651
Condition 2: 8 Hour
Replicate 1104.55411447236
Replicate 2146.96363594542
Replicate 3146.2321978705
Condition 3: 24 Hour
Replicate 1106.31001878228
Replicate 288.602119949187
Replicate 3106.31846185925


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_16896.p1 GENE.R_Transcript_16896~~R_Transcript_16896.p1 ORF type:complete len:463 (+),score=63.83,Peptidase_C1|PF00112.19|8e-86,Inhibitor_I29|PF08246.8|7.4e-18,Granulin|PF00396.14|1.1e+03,Granulin|PF00396.14|7.6e-11 R_Transcript_16896:53-1441(+)
ATGGGTTCCACTACAAAAATATCAGTCTTCTCCACACTATGCATGCTTTTGGCCATTTCATCGGCTTTAGACATGTCAATAATTTCACAAAATTCGGTCCACAACGGACCATCCGGTCGGACCGATGAGGAGATCATGGCTCTTTACGAGTCGTGGCTGGTAAAGCATGGAAAGAACTACAACGCTCTTGGTGAGAAAGAGCGGCGGTTTGAGATATTCGAGGACAACCTCCGGTTCATTGACCAGCATAATTCTCAGGACCGGAGTTACAAGCTTGGGTTGAACCGGTTCGCTGATTTGAGCAACGAGGAGTACCGGTCCATGTACTTGGGAACCCGGATTGATGGTAAGCGTCGTTTGGGCCGGTCCAAGAGTGACCGGTACGCTTACCGGGCTGGTGATAGCCTCCCAGATAGTATCGACTGGCGAGACGAAGGGGCTGTTGTGCCCGTCAAAGATCAAGGAAGCTGTGGTAGCTGCTGGGCATTTTCAACCATAGCTGCAGTAGAAGGGATAAACAAAATAGTAACAGGTGACTTGATATCATTGTCTGAGCAGGAGCTGGTAGATTGCGATATCGGCTACAATGAAGGATGCAATGGCGGTCTCATGGATTATGCTTTTCAATTTATCATCAATAATGGCGGTATTGACACTGATGATGACTATCCATACACGGGACGTGATGGCAAATGTGACACATATAGGAAAAATGCAAAGGTTGTCACCATAGATGACTACGAGGATGTTCCTGTGAATGACGAGAAGTCATTGCAGAAGGCTGTGGCAAATCAGCCAGTGAGTGTTGCCATTGAAGCCAGTGGCAGAGACTTTCAACTCTATCAATCTGGTGTTTTTGATGGCAAATGTGGGACAGAATTAGACCATGGTGTTACAGCTGTTGGGTATGGGACACAAGATGGAGTAGATTACTGGCTTGTTAGAAACTCATGGGGTGCAGACTGGGGAGAGCACGGCTACATTAAAATGAAACGTCATATTGGAGCTACAGGTGTATGCGGTATTGCAATGGAGTCTTCTTACCCGATCAAGAAGGGCCAGAACCCACCCAACCCTGGCCCGAGCCCTCCCTCACCAATCACGCCTCCCAGCGTCTGTGATGAGTACTACTCCTGCCCTCAGAGTACCACCTGCTGCTGTATATACCAATATGGAAGTTACTGCTTTTCTTGGGGTTGCTGCCCACTTGAGGGAGCCACTTGTTGTGAAGACCATTACAGTTGCTGCCCCCATGATTACCCCGTTTGCAATATCAATGAGGGCACCTGCTCAATGAGCAAGAACAACCCACTGTCAGTGAAGGCACTCAAGCGTACACCTGCAAAGCCTCATTGGGCATTAGGAAACATTGGAAAGAGCAGTGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_16896.p1 GENE.R_Transcript_16896~~R_Transcript_16896.p1 ORF type:complete len:463 (+),score=63.83,Peptidase_C1|PF00112.19|8e-86,Inhibitor_I29|PF08246.8|7.4e-18,Granulin|PF00396.14|1.1e+03,Granulin|PF00396.14|7.6e-11 R_Transcript_16896:53-1441(+)
MGSTTKISVFSTLCMLLAISSALDMSIISQNSVHNGPSGRTDEEIMALYESWLVKHGKNYNALGEKERRFEIFEDNLRFIDQHNSQDRSYKLGLNRFADLSNEEYRSMYLGTRIDGKRRLGRSKSDRYAYRAGDSLPDSIDWRDEGAVVPVKDQGSCGSCWAFSTIAAVEGINKIVTGDLISLSEQELVDCDIGYNEGCNGGLMDYAFQFIINNGGIDTDDDYPYTGRDGKCDTYRKNAKVVTIDDYEDVPVNDEKSLQKAVANQPVSVAIEASGRDFQLYQSGVFDGKCGTELDHGVTAVGYGTQDGVDYWLVRNSWGADWGEHGYIKMKRHIGATGVCGIAMESSYPIKKGQNPPNPGPSPPSPITPPSVCDEYYSCPQSTTCCCIYQYGSYCFSWGCCPLEGATCCEDHYSCCPHDYPVCNINEGTCSMSKNNPLSVKALKRTPAKPHWALGNIGKSSA*

Click here to download the sequence:
Link to NCBI Protein BLAST