Transcript Information: R_Transcript_169011.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value3E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.64206395318106
Replicate 20
Replicate 30.34532770245456
Condition 2: 8 Hour
Replicate 10.12304454747359
Replicate 20.3370987212239
Replicate 30.18242824744107
Condition 3: 24 Hour
Replicate 10.2307317309317
Replicate 20.11083044668632
Replicate 30.1099884657633


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_169011.p1 GENE.R_Transcript_169011~~R_Transcript_169011.p1 ORF type:complete len:199 (+),score=30.04,rve|PF00665.22|1.3e-10,gag_pre-integrs|PF13976.2|1.8e-08 R_Transcript_169011:102-698(+)
ATGAAGAGGCCCTTGGTTCTTGGTAAGCAGCAGGGGGGTCTCTACCTTCTACATCCCACAGAAGCATCTTCTTCTACCTCTTCAACTTCCAGTTGTACTTTTCCAATTTCAAACACAGTTCCTGTTTGTAATAACTCAGTTGTTAGCAATGTATCTGCTGAATGCTCCCTTTGGCATTCTAGACTTGGGCATTTGCCTTTGAATAAAATGAAACAATTGTCTCTCTTGCATATTGATACTGCTACAATTTCTGGTTTTCATTGTGAAGTGTGTCATCGAGCTAGGCAACACAAATTACCCTTCCCCCACAGCAATATTAAAACATCTAAGCCCTTTGAGTTAATGCATGTTGATATTTGGGGACCTTATCATCAACAAACACATGATGGCTACAAATATTTCCTTACAATTGTTGATGATTATAGCAGATGCACTTGGACTCATCTTTTAAGCTCCAAAGGCAATGCTTTCACCCTCATTAAATCCTTTGTTCATATGATTAAAACTCAATTCAGTTCTGACCTTCAGATTTTGAGGAGTGATAATGCTCTTGAACTTGGTAAAAGCCATGAAACCATCAGATTTTTTCAAGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_169011.p1 GENE.R_Transcript_169011~~R_Transcript_169011.p1 ORF type:complete len:199 (+),score=30.04,rve|PF00665.22|1.3e-10,gag_pre-integrs|PF13976.2|1.8e-08 R_Transcript_169011:102-698(+)
MKRPLVLGKQQGGLYLLHPTEASSSTSSTSSCTFPISNTVPVCNNSVVSNVSAECSLWHSRLGHLPLNKMKQLSLLHIDTATISGFHCEVCHRARQHKLPFPHSNIKTSKPFELMHVDIWGPYHQQTHDGYKYFLTIVDDYSRCTWTHLLSSKGNAFTLIKSFVHMIKTQFSSDLQILRSDNALELGKSHETIRFFQE*

Click here to download the sequence:
Link to NCBI Protein BLAST