Transcript Information: R_Transcript_169024.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.39748052453402
Condition 3: 24 Hour
Replicate 10
Replicate 20.32197458234419
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_169024.p1 GENE.R_Transcript_169024~~R_Transcript_169024.p1 ORF type:3prime_partial len:137 (+),score=22.41,gag_pre-integrs|PF13976.2|6.3e-07 R_Transcript_169024:160-567(+)
ATGAAGAGGCCCTTGGTTCTTGGTAAGCAGCAAGGGGGTCTTTATCTTCTCCACATTCCAGAAGCATCAAGTTCTTCCTCACATACCTCTTCTTCACTTGTTAATAGTCCTCTCTGTAATCAGTCTACTACAAATTCAGATTGTAATGTTTCTGTTTCTACCAATGTATCTTCTGAATGTTTACTATGGCATTCAAGACTTGGTCATTTACCACTTTATAAAATGAAACAATTGTCTATCACTTCTATTGATCATGCATCCCTTTCTCAGTTTCATTGTGAAATCTGTCATGGAGCAAGACAACACAAGTTGCCTTTTCCTCACAGCAGTATTAAAACTTCCAAATTTTTTGAGTTGATTCATGTTGACATATGGGGTCCTTATCACCAGCCTACTCATGATGGCTAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_169024.p1 GENE.R_Transcript_169024~~R_Transcript_169024.p1 ORF type:3prime_partial len:137 (+),score=22.41,gag_pre-integrs|PF13976.2|6.3e-07 R_Transcript_169024:160-567(+)
MKRPLVLGKQQGGLYLLHIPEASSSSSHTSSSLVNSPLCNQSTTNSDCNVSVSTNVSSECLLWHSRLGHLPLYKMKQLSITSIDHASLSQFHCEICHGARQHKLPFPHSSIKTSKFFELIHVDIWGPYHQPTHDGY

Click here to download the sequence:
Link to NCBI Protein BLAST