Transcript Information: R_Transcript_169056.p1


Annotated TAIR IDAT4G24090.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 144 Blast hits to 142 proteins in 73 species: Archae - 3; Bacteria - 62; Metazoa - 7; Fungi - 13; Plants - 44; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:12512742-12514467 | Forward length=308
E-Value8E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6029512453152
Replicate 21.3085513007325
Replicate 31.5573985901067
Condition 2: 8 Hour
Replicate 12.2890468647566
Replicate 21.5202865841033
Replicate 31.9539977438377
Condition 3: 24 Hour
Replicate 12.5364149628342
Replicate 21.8119051213222
Replicate 31.7981400450992


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_169056.p1 GENE.R_Transcript_169056~~R_Transcript_169056.p1 ORF type:5prime_partial len:353 (+),score=58.20 R_Transcript_169056:2-1060(+)
AAAAAGACAATAGAGGATAAGGGAGAGAAAAACAGAAATAAGGGGGTAAGAAAAAGAAGCAGGGCTCACCAGTTGGTCATTGAATCGGAGCAACAGCTTCTCTTTCTCAACCTCTGTTTCTGGGTGTCAAAAGAAATCGCGATGCCAATGCCACAACCAGGCGCTCTAGACCCAAGCATGGTCCTCTCTCTCCAACCCAAAACTCCATTCAGGATATTCTCCTTGTCAGCAGAAAAGAGACGGTTAAGCATAATCAGATGGCAAGGGCAATCATCCAGGCCAGCTATTCACATGGTAAAATGCAGCTCCAGCTCAGACCCAGAGGGTGGTGGGGGTGACATGAAGAATACTCTATCGGGTATGGTGGACAAAAGGGTGGAGGAATTGCTGGGCAGAGAAGAGAATAAAGAATTGCTCGATAAACTCACTAAGGCCTCTGAAAGAGTGGAGCTTGCCAGGAACCAGCTTGCTGATATTCAAAGGCAAGAACTCGAAGCCCAGCAGATGAGACTTTACATCGACCAGCTCGAAACCCGAGCCTCTGAGATTGCAGAATGCCAGCAGGAAGTGCTAGAAGCGAAAGCAATGGTTGAAGAAGCAGAGCGATTTTTATCAATCAGCGGGGAAATAAGCAAAGATGAAGAGAGGTTGGAGTCAGTGAAAGCTGCTTCCATATCCGCCTTGGTGGGCACCCTTGCTGGCCTCCCCATCTATCTTAGTAGGGTGACCAGCAGTCCTCAGCTGTTACTCCAGTTAGGAATTACATTTGCTAGCTGTGCCCTGTTTGGTCTCACCTTTCGTTATGCAGTCAGAAGAGACTTGGATAATATACAACTTAAAACCGGGACATCTGCAGCATTTGCTGTTGTTAAAGGTTTTGCTACATTAAATGGAGGACCTCCACTAGAACTGAGCTCAGTAAGCTTCTTATCGCATGCTCAGGATGCGGCATCCTTTGTAATCCAGGACCTGTTCATATTCATTTTTGCAGCAGTAAGTTTGGACTTCTGCTTTAAAATGAGGATAGTGAGTCCTTTCCCTATCGAAAGATCAGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_169056.p1 GENE.R_Transcript_169056~~R_Transcript_169056.p1 ORF type:5prime_partial len:353 (+),score=58.20 R_Transcript_169056:2-1060(+)
KKTIEDKGEKNRNKGVRKRSRAHQLVIESEQQLLFLNLCFWVSKEIAMPMPQPGALDPSMVLSLQPKTPFRIFSLSAEKRRLSIIRWQGQSSRPAIHMVKCSSSSDPEGGGGDMKNTLSGMVDKRVEELLGREENKELLDKLTKASERVELARNQLADIQRQELEAQQMRLYIDQLETRASEIAECQQEVLEAKAMVEEAERFLSISGEISKDEERLESVKAASISALVGTLAGLPIYLSRVTSSPQLLLQLGITFASCALFGLTFRYAVRRDLDNIQLKTGTSAAFAVVKGFATLNGGPPLELSSVSFLSHAQDAASFVIQDLFIFIFAAVSLDFCFKMRIVSPFPIERSD*

Click here to download the sequence:
Link to NCBI Protein BLAST