Transcript Information: R_Transcript_169180.p1


Annotated TAIR IDAT5G65260.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26080501-26082984 | Reverse length=220
E-Value3E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9800752579133
Replicate 22.785223524611
Replicate 33.9736177462713
Condition 2: 8 Hour
Replicate 13.7478364715171
Replicate 25.0197898010825
Replicate 37.4088206613824
Condition 3: 24 Hour
Replicate 13.7482134249313
Replicate 24.9511805672725
Replicate 32.233439253765


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_169180.p1 GENE.R_Transcript_169180~~R_Transcript_169180.p1 ORF type:3prime_partial len:98 (-),score=25.74,RRM_1|PF00076.18|3.6e-17,RRM_6|PF14259.2|2.7e-11 R_Transcript_169180:2-292(-)
ATGGGCGCCGTTCAAGATCCTGCTAGTGCTGCTGATATGGCAAGCAGGGAGGAGGTAGATTCACGGTCTGTATTTGTTGGCAATGTTGATTATGCGTGCACCCCAGAAGAAGTCCAGCAACATTTTCAATCTTGTGGAACAGTGAATAGAGTGACCATTCTGACAGACAAGTTTGGCCAGCCAAAGGGTTTTGCCTATGTTGAATTTGTTGAGCAGGAAGCTGTTCAACAGGCTCTCCTATTGAATGAATCTGAATTACATGGAAGGTTGAGAAGGAGATGGGCGCCGTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_169180.p1 GENE.R_Transcript_169180~~R_Transcript_169180.p1 ORF type:3prime_partial len:98 (-),score=25.74,RRM_1|PF00076.18|3.6e-17,RRM_6|PF14259.2|2.7e-11 R_Transcript_169180:2-292(-)
MGAVQDPASAADMASREEVDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEQEAVQQALLLNESELHGRLRRRWAPF

Click here to download the sequence:
Link to NCBI Protein BLAST